RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ANO4Q32M45 955 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 PCGF5Q86SE9 256 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 CD302Q8IX05 232 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 SCG3Q8WXD2 468 aaKnown RBP8.48□□□□□ -1.05
USP47-203ENST00000399455 VTA1Q9NP79 307 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 DDX56Q9NY93 547 aaKnown RBP8.48□□□□□ -1.05
USP47-203ENST00000399455 SMARCA1P28370 1054 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 NR5A1Q13285 461 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 FAM173BQ6P4H8 233 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 ZFP91Q96JP5 570 aaPredicted RBP8.48□□□□□ -1.05
USP47-203ENST00000399455 SAR1BQ9Y6B6 198 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 LRRD1A4D1F6 860 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 C2CD2LO14523 706 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 IFNAR2P48551 515 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 SLC26A2P50443 739 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 ZNF131P52739 623 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 CXCL9Q07325 125 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 IKBKEQ14164 716 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 TFDP2Q14188 446 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 SNX19Q92543 992 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 SDCCAG3Q96C92 435 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 RALBP11234 206 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 SEMA3FQ13275 785 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 CYB5R4Q7L1T6 521 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 HERC6Q8IVU3 1022 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 RHOT2Q8IXI1 618 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 ASAP3Q8TDY4 903 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 SENP6Q9GZR1 1112 aaPredicted RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 DIS3Q9Y2L1 958 aaKnown RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 COBLO75128 1261 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 CKBP12277 381 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 GTF2F1P35269 517 aaKnown RBP eCLIP8.47□□□□□ -1.05
USP47-203ENST00000399455 DGKZQ13574 1117 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 RABL6Q3YEC7 729 aaPredicted RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 ZNF746Q6NUN9 644 aaPredicted RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 NECAB2Q7Z6G3 386 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 TRIM48Q8IWZ4 208 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 CARD6Q9BX69 1037 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 IP6K2Q9UHH9 426 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 TMEM131LA2VDJ0 1609 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 VWDEQ8N2E2 1590 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 ADM5C9JUS6 153 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 DFFAO00273 331 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 PPP1R12AO14974 1030 aaPredicted RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 DNAJC6O75061 913 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 TCP1P17987 556 aaKnown RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 RPL10AP62906 217 aaKnown RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 COASYQ13057 564 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 KNOP1Q1ED39 458 aaKnown RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 TTC19Q6DKK2 380 aaPredicted RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 PAGE5Q96GU1 130 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 POLLQ9UGP5 575 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 RGS16O15492 202 aaPredicted RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 MMEL1Q495T6 779 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 ZNF668Q96K58 619 aaPredicted RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 ADAM22Q9P0K1 906 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 KLRC2P26717 231 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 BASP1P80723 227 aaKnown RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 ATP11AP98196 1134 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 TMED2Q15363 201 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 WHAMMP3Q1A5X7 153 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 TAF1BQ53T94 588 aaPredicted RBP8.47□□□□□ -1.05
USP47-203ENST00000399455 CEP120Q8N960 986 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 GMCL1P1Q8NEA9 526 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 EHD4Q9H223 541 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 ECEL1O95672 775 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 PLS3P13797 630 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 PTGISQ16647 500 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 MCUQ8NE86 351 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 MCUR1Q96AQ8 359 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 CFAP36Q96G28 342 aa8.47□□□□□ -1.05
USP47-203ENST00000399455 POTEMA6NI47 508 aa8.46□□□□□ -1.05
USP47-203ENST00000399455 EFCAB14O75071 495 aa8.46□□□□□ -1.05
USP47-203ENST00000399455 GPC4O75487 556 aa8.46□□□□□ -1.05
USP47-203ENST00000399455 HPDP32754 393 aaPredicted RBP8.46□□□□□ -1.05
USP47-203ENST00000399455 FAM133AQ8N9E0 248 aa8.46□□□□□ -1.05
USP47-203ENST00000399455 PBKQ96KB5 322 aa8.46□□□□□ -1.05
USP47-203ENST00000399455 TUBE1Q9UJT0 475 aa8.46□□□□□ -1.05
USP47-203ENST00000399455 AGAP1Q9UPQ3 857 aa8.46□□□□□ -1.05
USP47-203ENST00000399455 C3P01024 1663 aa8.46□□□□□ -1.05
USP47-203ENST00000399455 FAM170AA1A519 330 aa8.46□□□□□ -1.05
USP47-203ENST00000399455 POTECB2RU33 542 aa8.46□□□□□ -1.05
USP47-203ENST00000399455 CDKL3Q8IVW4 592 aaPredicted RBP8.46□□□□□ -1.05
USP47-203ENST00000399455 AKAP7Q9P0M2 348 aaPredicted RBP8.46□□□□□ -1.05
USP47-203ENST00000399455 MAN1B1Q9UKM7 699 aa8.46□□□□□ -1.05
USP47-203ENST00000399455 MTMR6Q9Y217 621 aa8.46□□□□□ -1.05
USP47-203ENST00000399455 PVALEFA0A1B0GWK0 134 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 TTLL13PA6NNM8 815 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 GSTA4O15217 222 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 MAP4P27816 1152 aaKnown RBP8.46□□□□□ -1.06
USP47-203ENST00000399455 ATICP31939 592 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 OAZ1P54368 228 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 NSUN2Q08J23 767 aaKnown RBP eCLIP8.46□□□□□ -1.06
USP47-203ENST00000399455 MTA1Q13330 715 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 BTG3Q14201 252 aaPredicted RBP8.46□□□□□ -1.06
USP47-203ENST00000399455 ANKRD20A3Q5VUR7 823 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 TAS2R42Q7RTR8 314 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 GLYCTKQ8IVS8 523 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 ZNF579Q8NAF0 562 aaKnown RBP8.46□□□□□ -1.06
USP47-203ENST00000399455 SPATA16Q9BXB7 569 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms