RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 ZFXP17010 805 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-205ENST00000399050 RFX1P22670 979 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 CTCFP49711 727 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-205ENST00000399050 MORF4L2Q15014 288 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 SURF1Q15526 300 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 RHPN2Q8IUC4 686 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 DHX38Q92620 1227 aaKnown RBP9.17□□□□□ -0.94
CTNND1-205ENST00000399050 NCLNQ969V3 563 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 MTA3Q9BTC8 594 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 NGRNQ9NPE2 291 aaKnown RBP9.17□□□□□ -0.94
CTNND1-205ENST00000399050 DDX56Q9NY93 547 aaKnown RBP9.17□□□□□ -0.94
CTNND1-205ENST00000399050 E2F6O75461 281 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 SSTR3P32745 418 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-205ENST00000399050 HDAC4P56524 1084 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 ERVK-24P63145 666 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 DNAL1Q4LDG9 190 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 NIM1KQ8IY84 436 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 MYCBPAPQ8TBZ2 947 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 FUCA2Q9BTY2 467 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 PALMDQ9NP74 551 aa9.17□□□□□ -0.94
CTNND1-205ENST00000399050 LOC102724428A0A0B4J2F2 783 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 ERVV-1B6SEH8 477 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 RHOBTB3O94955 611 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 TDP2O95551 362 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 TRIM49P0CI25 452 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 TRIM49CP0CI26 452 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 KCNA4P22459 653 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 SIK1P57059 783 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 P3H1Q32P28 736 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 NBPF20Q3BBV1 942 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 RABGAP1LQ5R372 815 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 LRRC8EQ6NSJ5 796 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 SRBD1Q8N5C6 995 aaKnown RBP9.16□□□□□ -0.94
CTNND1-205ENST00000399050 TRIM9Q9C026 710 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 STX18Q9P2W9 335 aaKnown RBP9.16□□□□□ -0.94
CTNND1-205ENST00000399050 CDC42BPAQ5VT25 1732 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 CDC42BPGQ6DT37 1551 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 PPP1R3GB7ZBB8 358 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 SEC24DO94855 1032 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-205ENST00000399050 NQO1P15559 274 aaKnown RBP9.16□□□□□ -0.94
CTNND1-205ENST00000399050 ITIH2P19823 946 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 GNA15P30679 374 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 SUSD4Q5VX71 490 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 SLFN12LQ6IEE8 588 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 C4orf33Q8N1A6 199 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 TMEM35BQ8NCS4 154 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 RANBP17Q9H2T7 1088 aaKnown RBP9.16□□□□□ -0.94
CTNND1-205ENST00000399050 LZTS1Q9Y250 596 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 ABCC3O15438 1527 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 UBE4BO95155 1302 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 PALM3A6NDB9 673 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-205ENST00000399050 USP17L15C9J2P7 530 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 USP17L13C9JLJ4 530 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 USP17L11C9JVI0 530 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 USP17L18D6R9N7 530 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 USP17L22D6RA61 530 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 USP17L17D6RBQ6 530 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 USP17L19D6RCP7 530 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 USP17L20D6RJB6 530 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 PPEF1O14829 653 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-205ENST00000399050 SLC16A4O15374 487 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 ANP32DO95626 131 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 PAMP19021 973 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 GALCP54803 685 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 FOXO4P98177 505 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 USP17L24Q0WX57 530 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 TFDP2Q14188 446 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 ITIH4Q14624 930 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 PPP1R18Q6NYC8 613 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 USP17L6PQ6QN14 398 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 PADI6Q6TGC4 694 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 LRRC34Q8IZ02 419 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 ZBTB10Q96DT7 871 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 C7orf25Q9BPX7 421 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 FAM213AQ9BRX8 229 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 RPF1Q9H9Y2 349 aaKnown RBP9.16□□□□□ -0.94
CTNND1-205ENST00000399050 FOXP2O15409 715 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 CLDN3O15551 220 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 NT5C2P49902 561 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 GRM1Q13255 1194 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 JAMLQ86YT9 394 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 C3orf20Q8ND61 904 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 LRRN4CLQ8ND94 238 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 AGR3Q8TD06 166 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 THTPAQ9BU02 230 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 ROPN1BQ9BZX4 212 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-205ENST00000399050 ROPN1Q9HAT0 212 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-205ENST00000399050 SUN2Q9UH99 717 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 PCSK1NQ9UHG2 260 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 L1RE1Q9UN81 338 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 EMSYQ7Z589 1322 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 SETD1BQ9UPS6 1966 aaKnown RBP9.16□□□□□ -0.94
CTNND1-205ENST00000399050 PDHBP11177 359 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 SMARCA1P28370 1054 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 VHLP40337 213 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 AP1B1Q10567 949 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 TSTA3Q13630 321 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-205ENST00000399050 DCAF4Q8WV16 495 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 ANKZF1Q9H8Y5 726 aa9.16□□□□□ -0.94
CTNND1-205ENST00000399050 BSDC1Q9NW68 430 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms