RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 PCDHA12Q9UN75 941 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 IPPQ9Y573 584 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 MYH15Q9Y2K3 1946 aa12.39□□□□□ -0.43
SRMP1-201ENST00000398959 INO80B-WBP1J3KQ70 363 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 C2CD2LO14523 706 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 TSPAN1O60635 241 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 SLITRK3O94933 977 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 URODP06132 367 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 NEFLP07196 543 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 ASGR2P07307 311 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 CNPP09543 421 aaKnown RBP12.38□□□□□ -0.43
SRMP1-201ENST00000398959 OR1G1P47890 313 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 CLCN4P51793 760 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 ANAPC15P60006 121 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 PTENP60484 403 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 ZDHHC14Q8IZN3 488 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 NECAB1Q8N987 351 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 SMG8Q8ND04 991 aaKnown RBP12.38□□□□□ -0.43
SRMP1-201ENST00000398959 ACSF2Q96CM8 615 aaPredicted RBP12.38□□□□□ -0.43
SRMP1-201ENST00000398959 KLHL5Q96PQ7 755 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 APOL6Q9BWW8 343 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 EIF2AQ9BY44 585 aaKnown RBP12.38□□□□□ -0.43
SRMP1-201ENST00000398959 TRIM6Q9C030 488 aaPredicted RBP12.38□□□□□ -0.43
SRMP1-201ENST00000398959 IRF2BPLQ9H1B7 796 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 LIMD1Q9UGP4 676 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 USTQ9Y2C2 406 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 SSX2IPQ9Y2D8 614 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 PRG3Q9Y2Y8 225 aaPredicted RBP12.38□□□□□ -0.43
SRMP1-201ENST00000398959 VWA8A3KMH1 1905 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 CITO14578 2027 aa12.38□□□□□ -0.43
SRMP1-201ENST00000398959 ARL5CA6NH57 179 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 NEMFO60524 1076 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 NR1I2O75469 434 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 DGAT1O75907 488 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 SOD2P04179 222 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 FDPSP14324 419 aaKnown RBP12.37□□□□□ -0.43
SRMP1-201ENST00000398959 MLH1P40692 756 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 TXKP42681 527 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 FOSBP53539 338 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 TRIM29Q14134 588 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 CCDC149Q6ZUS6 474 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 GPR149Q86SP6 731 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 COLGALT2Q8IYK4 626 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 HACE1Q8IYU2 909 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 ATOH1Q92858 354 aaPredicted RBP12.37□□□□□ -0.43
SRMP1-201ENST00000398959 GTF3C6Q969F1 213 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 CCDC51Q96ER9 411 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 GAD1Q99259 594 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 CSRNP2Q9H175 543 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 MFSD1Q9H3U5 465 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 SMOC2Q9H3U7 446 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 TTC12Q9H892 705 aaPredicted RBP12.37□□□□□ -0.43
SRMP1-201ENST00000398959 XPNPEP1Q9NQW7 623 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 ANKEF1Q9NU02 776 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 FAM86C1Q9NVL1 165 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 HES2Q9Y543 173 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 MIA3Q5JRA6 1907 aa12.37□□□□□ -0.43
SRMP1-201ENST00000398959 LYPLA2O95372 231 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 ADH1AP07327 375 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 SCNN1GP51170 649 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 NUBP1P53384 320 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 MBTD1Q05BQ5 628 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 POU5F1BQ06416 359 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 CAPSQ13938 189 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 ME3Q16798 604 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 ELMSAN1Q6PJG2 1045 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 OTOP3Q7RTS5 596 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 FEZF2Q8TBJ5 459 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 ASAP3Q8TDY4 903 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 TNFRSF25Q93038 417 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 HSD17B14Q9BPX1 270 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 HERC2P3Q9BVR0 1158 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 RNF39Q9H2S5 420 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 MAN1C1Q9NR34 630 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 MARCH5Q9NX47 278 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 MYO15AQ9UKN7 3530 aa12.36□□□□□ -0.43
SRMP1-201ENST00000398959 BTBD18B2RXH4 712 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 USO1O60763 962 aaKnown RBP12.35□□□□□ -0.43
SRMP1-201ENST00000398959 LILRB3O75022 631 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 LARGE1O95461 756 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 ARF4P18085 180 aaPredicted RBP12.35□□□□□ -0.43
SRMP1-201ENST00000398959 GLUD2P49448 558 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 C15orf39Q6ZRI6 1047 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 TAS1R1Q7RTX1 841 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 IFNLR1Q8IU57 520 aaPredicted RBP12.35□□□□□ -0.43
SRMP1-201ENST00000398959 DIS3L2Q8IYB7 885 aaKnown RBP12.35□□□□□ -0.43
SRMP1-201ENST00000398959 NSUN7Q8NE18 718 aaKnown RBP12.35□□□□□ -0.43
SRMP1-201ENST00000398959 PIGOQ8TEQ8 1089 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 ZFP42Q96MM3 310 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 RPS6KC1Q96S38 1066 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 NFKBIZQ9BYH8 718 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 POLR3FQ9H1D9 316 aaPredicted RBP12.35□□□□□ -0.43
SRMP1-201ENST00000398959 NXF3Q9H4D5 531 aaKnown RBP12.35□□□□□ -0.43
SRMP1-201ENST00000398959 MIOSQ9NXC5 875 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 DPP7Q9UHL4 492 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 GIT1Q9Y2X7 761 aa12.35□□□□□ -0.43
SRMP1-201ENST00000398959 PDCD11Q14690 1871 aaKnown RBP12.35□□□□□ -0.43
SRMP1-201ENST00000398959 A0A087WWV3 80 aa12.34□□□□□ -0.43
SRMP1-201ENST00000398959 POTEMA6NI47 508 aa12.34□□□□□ -0.43
SRMP1-201ENST00000398959 LRRIQ4A6NIV6 560 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms