RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PTGDRQ13258 359 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 BMS1Q14692 1282 aaKnown RBP14.87□□□□□ -0.03
VCX3A-202ENST00000398729 UBXN11Q5T124 520 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 MCTP1Q6DN14 999 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 AGMOQ6ZNB7 445 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 C4orf32Q8N8J7 132 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 SUSD6Q92537 303 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 RPGRIP1Q96KN7 1286 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 TBC1D32Q96NH3 1257 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 PHF7Q9BWX1 381 aaPredicted RBP14.87□□□□□ -0.03
VCX3A-202ENST00000398729 RAB34Q9BZG1 259 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 NRDE2Q9H7Z3 1164 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 UBN1Q9NPG3 1134 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 FAM86C1Q9NVL1 165 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 KANSL3Q9P2N6 904 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 PCDHB6Q9Y5E3 794 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 STK24Q9Y6E0 443 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 LRRIQ4A6NIV6 560 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 LAD1O00515 517 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 CD2BP2O95400 341 aaKnown RBP14.86□□□□□ -0.03
VCX3A-202ENST00000398729 SRGAP2BP0DMP2 458 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 ITGA4P13612 1032 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 GJB2P29033 226 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 VCPP55072 806 aaKnown RBP14.86□□□□□ -0.03
VCX3A-202ENST00000398729 SIGLEC14Q08ET2 396 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 PDIA5Q14554 519 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 SMC1AQ14683 1233 aaKnown RBP14.86□□□□□ -0.03
VCX3A-202ENST00000398729 PADI6Q6TGC4 694 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 CPB2Q96IY4 423 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 FAM193BQ96PV7 902 aaPredicted RBP14.86□□□□□ -0.03
VCX3A-202ENST00000398729 PRRX2Q99811 253 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 TRIM6Q9C030 488 aaPredicted RBP14.86□□□□□ -0.03
VCX3A-202ENST00000398729 GBP3Q9H0R5 595 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 CSRNP2Q9H175 543 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 GPRC5CQ9NQ84 441 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 LRWD1Q9UFC0 647 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 MYO10Q9HD67 2058 aa14.86□□□□□ -0.03
VCX3A-202ENST00000398729 H3BQV1 296 aa14.85□□□□□ -0.03
VCX3A-202ENST00000398729 GALTP07902 379 aa14.85□□□□□ -0.03
VCX3A-202ENST00000398729 ARF4P18085 180 aaPredicted RBP14.85□□□□□ -0.03
VCX3A-202ENST00000398729 CYP11B2P19099 503 aa14.85□□□□□ -0.03
VCX3A-202ENST00000398729 AVPR2P30518 371 aa14.85□□□□□ -0.03
VCX3A-202ENST00000398729 AMHR2Q16671 573 aa14.85□□□□□ -0.03
VCX3A-202ENST00000398729 RILPL1Q5EBL4 403 aa14.85□□□□□ -0.03
VCX3A-202ENST00000398729 ZBTB8OSQ8IWT0 167 aa14.85□□□□□ -0.03
VCX3A-202ENST00000398729 SUGP1Q8IWZ8 645 aaKnown RBP14.85□□□□□ -0.03
VCX3A-202ENST00000398729 HACE1Q8IYU2 909 aa14.85□□□□□ -0.03
VCX3A-202ENST00000398729 MRPL43Q8N983 215 aaKnown RBP14.85□□□□□ -0.03
VCX3A-202ENST00000398729 SMG8Q8ND04 991 aaKnown RBP14.85□□□□□ -0.03
VCX3A-202ENST00000398729 IGSF21Q96ID5 467 aa14.85□□□□□ -0.03
VCX3A-202ENST00000398729 EIF2AQ9BY44 585 aaKnown RBP14.85□□□□□ -0.03
VCX3A-202ENST00000398729 S1PR5Q9H228 398 aa14.85□□□□□ -0.03
VCX3A-202ENST00000398729 IPPQ9Y573 584 aa14.85□□□□□ -0.03
VCX3A-202ENST00000398729 HIDE1A8MVS5 230 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 CA8P35219 290 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 PRPHP41219 470 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 SLC11A1P49279 550 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 KCNC3Q14003 757 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 TMEM184AQ6ZMB5 413 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 DTHD1Q6ZMT9 781 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 DDX53Q86TM3 631 aaKnown RBP14.84□□□□□ -0.03
VCX3A-202ENST00000398729 TMEM173Q86WV6 379 aaPredicted RBP14.84□□□□□ -0.03
VCX3A-202ENST00000398729 ZNF280BQ86YH2 543 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 VPS52Q8N1B4 723 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 IGSF22Q8N9C0 903 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 SNX29Q8TEQ0 813 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 TMEM175Q9BSA9 504 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 C2orf40Q9H1Z8 148 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 PRMT7Q9NVM4 692 aaPredicted RBP14.84□□□□□ -0.03
VCX3A-202ENST00000398729 DNAJB4Q9UDY4 337 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 KIAA1024Q9UPX6 916 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 SMC3Q9UQE7 1217 aa14.84□□□□□ -0.03
VCX3A-202ENST00000398729 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.84□□□□□ -0.03
VCX3A-202ENST00000398729 DCHS1Q96JQ0 3298 aa14.83□□□□□ -0.03
VCX3A-202ENST00000398729 GVINP1Q7Z2Y8 2422 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 KMT2EQ8IZD2 1858 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 C2orf71A6NGG8 1288 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 B4GALT5O43286 388 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 DDHD2O94830 711 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 CXCL14O95715 111 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 PDGFBP01127 241 aaPredicted RBP14.83□□□□□ -0.04
VCX3A-202ENST00000398729 POMCP01189 267 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 ALDH2P05091 517 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 NAMPTP43490 491 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 AFF1P51825 1210 aaKnown RBP14.83□□□□□ -0.04
VCX3A-202ENST00000398729 GIT2Q14161 759 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 PPP2R5AQ15172 486 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 ECM1Q16610 540 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 KRT79Q5XKE5 535 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 CDCA2Q69YH5 1023 aaPredicted RBP14.83□□□□□ -0.04
VCX3A-202ENST00000398729 SLC27A1Q6PCB7 646 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 PPP4R3CPQ6ZMV5 832 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 TMEM87AQ8NBN3 555 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 DEPTORQ8TB45 409 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 PRIMPOLQ96LW4 560 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 GAD1Q99259 594 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 ZBP1Q9H171 429 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 BHMT2Q9H2M3 363 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.83□□□□□ -0.04
VCX3A-202ENST00000398729 DDX19AQ9NUU7 478 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms