RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 LONRF3Q496Y0 759 aa28.05■■■□□ 2.08
U2AF1-203ENST00000398137 GRAMD1CQ8IYS0 662 aa28.05■■■□□ 2.08
U2AF1-203ENST00000398137 DDX12PQ92771 950 aa28.05■■■□□ 2.08
U2AF1-203ENST00000398137 PABPC5Q96DU9 382 aaKnown RBP28.05■■■□□ 2.08
U2AF1-203ENST00000398137 IFT74Q96LB3 600 aa28.05■■■□□ 2.08
U2AF1-203ENST00000398137 GCOM2Q9BZD3 368 aaPredicted RBP28.05■■■□□ 2.08
U2AF1-203ENST00000398137 ELAC1Q9H777 363 aaKnown RBP28.05■■■□□ 2.08
U2AF1-203ENST00000398137 CD320Q9NPF0 282 aa28.05■■■□□ 2.08
U2AF1-203ENST00000398137 USP25Q9UHP3 1055 aa28.05■■■□□ 2.08
U2AF1-203ENST00000398137 TBKBP1A7MCY6 615 aa28.04■■■□□ 2.08
U2AF1-203ENST00000398137 TBCAO75347 108 aaKnown RBP28.04■■■□□ 2.08
U2AF1-203ENST00000398137 CSPG5O95196 566 aa28.04■■■□□ 2.08
U2AF1-203ENST00000398137 GTF2F1P35269 517 aaKnown RBP eCLIP28.04■■■□□ 2.08
U2AF1-203ENST00000398137 PHKA2P46019 1235 aa28.04■■■□□ 2.08
U2AF1-203ENST00000398137 CTC1Q2NKJ3 1217 aa28.04■■■□□ 2.08
U2AF1-203ENST00000398137 IFT122Q9HBG6 1241 aa28.04■■■□□ 2.08
U2AF1-203ENST00000398137 ODF2LQ9ULJ1 636 aa28.04■■■□□ 2.08
U2AF1-203ENST00000398137 H3BQ06 376 aaPredicted RBP28.03■■■□□ 2.08
U2AF1-203ENST00000398137 FAM13AO94988 1023 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 ZNF202O95125 648 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 LIG1P18858 919 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 IRS1P35568 1242 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 NAMPTP43490 491 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 AFMP43652 599 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 PEX3P56589 373 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 UBE2HP62256 183 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 FAM160A1Q05DH4 1040 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 PPP2R5AQ15172 486 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 FMR1NBQ8N0W7 255 aaPredicted RBP28.03■■■□□ 2.08
U2AF1-203ENST00000398137 KIFC3Q9BVG8 833 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 ZHX3Q9H4I2 956 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 CWH43Q9H720 699 aa28.03■■■□□ 2.08
U2AF1-203ENST00000398137 IL9P15248 144 aa28.02■■■□□ 2.08
U2AF1-203ENST00000398137 DLX2Q07687 328 aaPredicted RBP28.02■■■□□ 2.08
U2AF1-203ENST00000398137 DMP1Q13316 513 aaPredicted RBP28.02■■■□□ 2.08
U2AF1-203ENST00000398137 LRRC55Q6ZSA7 311 aa28.02■■■□□ 2.08
U2AF1-203ENST00000398137 DEPTORQ8TB45 409 aa28.02■■■□□ 2.08
U2AF1-203ENST00000398137 DNAJC19Q96DA6 116 aa28.02■■■□□ 2.08
U2AF1-203ENST00000398137 CASD1Q96PB1 797 aa28.02■■■□□ 2.08
U2AF1-203ENST00000398137 MINDY3Q9H8M7 445 aa28.02■■■□□ 2.08
U2AF1-203ENST00000398137 TYW1Q9NV66 732 aaKnown RBP28.02■■■□□ 2.08
U2AF1-203ENST00000398137 PLS3P13797 630 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 ATF7P17544 494 aaPredicted RBP28.01■■■□□ 2.07
U2AF1-203ENST00000398137 CASP1P29466 404 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 PTENP60484 403 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 AMPD3Q01432 767 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 KRBA2Q6ZNG9 492 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 ADGRD2Q7Z7M1 963 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 ZNF598Q86UK7 904 aaKnown RBP28.01■■■□□ 2.07
U2AF1-203ENST00000398137 ECHDC2Q86YB7 292 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 CNNM3Q8NE01 707 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 ENGASEQ8NFI3 743 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 KHSRPQ92945 711 aaKnown RBP eCLIP28.01■■■□□ 2.07
U2AF1-203ENST00000398137 PAGE5Q96GU1 130 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 TRIM9Q9C026 710 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 LRRC27Q9C0I9 530 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 BLZF1Q9H2G9 400 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 PCDHGC5Q9Y5F6 944 aa28.01■■■□□ 2.07
U2AF1-203ENST00000398137 GRXCR2A6NFK2 248 aa28■■■□□ 2.07
U2AF1-203ENST00000398137 CCDC169A6NNP5 214 aa28■■■□□ 2.07
U2AF1-203ENST00000398137 IDEP14735 1019 aa28■■■□□ 2.07
U2AF1-203ENST00000398137 NPTX2P47972 431 aa28■■■□□ 2.07
U2AF1-203ENST00000398137 ZNF131P52739 623 aa28■■■□□ 2.07
U2AF1-203ENST00000398137 ASIC1P78348 528 aa28■■■□□ 2.07
U2AF1-203ENST00000398137 SNW1Q13573 536 aaKnown RBP28■■■□□ 2.07
U2AF1-203ENST00000398137 CDCA2Q69YH5 1023 aaPredicted RBP28■■■□□ 2.07
U2AF1-203ENST00000398137 SRGAP1Q7Z6B7 1085 aa28■■■□□ 2.07
U2AF1-203ENST00000398137 POF1BQ8WVV4 589 aa28■■■□□ 2.07
U2AF1-203ENST00000398137 C17orf75Q9HAS0 396 aa28■■■□□ 2.07
U2AF1-203ENST00000398137 PARVGQ9HBI0 331 aa28■■■□□ 2.07
U2AF1-203ENST00000398137 LINC01565O15544 149 aa27.99■■■□□ 2.07
U2AF1-203ENST00000398137 NR1I2O75469 434 aa27.99■■■□□ 2.07
U2AF1-203ENST00000398137 SFPQP23246 707 aaKnown RBP eCLIP27.99■■■□□ 2.07
U2AF1-203ENST00000398137 POU5F1BQ06416 359 aa27.99■■■□□ 2.07
U2AF1-203ENST00000398137 CLLU1OSQ5K130 101 aa27.99■■■□□ 2.07
U2AF1-203ENST00000398137 PTCRAQ6ISU1 281 aaPredicted RBP27.99■■■□□ 2.07
U2AF1-203ENST00000398137 IFNLR1Q8IU57 520 aaPredicted RBP27.99■■■□□ 2.07
U2AF1-203ENST00000398137 ZBTB8OSQ8IWT0 167 aa27.99■■■□□ 2.07
U2AF1-203ENST00000398137 MYCT1Q8N699 235 aa27.99■■■□□ 2.07
U2AF1-203ENST00000398137 INO80BQ9C086 356 aaPredicted RBP27.99■■■□□ 2.07
U2AF1-203ENST00000398137 KMT5AQ9NQR1 393 aa27.99■■■□□ 2.07
U2AF1-203ENST00000398137 CLDND1Q9NY35 253 aa27.99■■■□□ 2.07
U2AF1-203ENST00000398137 MYH11P35749 1972 aa27.99■■■□□ 2.07
U2AF1-203ENST00000398137 C5orf42Q9H799 3197 aa27.98■■■□□ 2.07
U2AF1-203ENST00000398137 A0A0U1RQF3 1178 aa27.98■■■□□ 2.07
U2AF1-203ENST00000398137 INO80B-WBP1J3KQ70 363 aa27.98■■■□□ 2.07
U2AF1-203ENST00000398137 SLC16A4O15374 487 aa27.98■■■□□ 2.07
U2AF1-203ENST00000398137 ZSCAN20P17040 1043 aaPredicted RBP27.98■■■□□ 2.07
U2AF1-203ENST00000398137 MBTD1Q05BQ5 628 aa27.98■■■□□ 2.07
U2AF1-203ENST00000398137 SFR1Q86XK3 245 aa27.98■■■□□ 2.07
U2AF1-203ENST00000398137 COLGALT1Q8NBJ5 622 aa27.98■■■□□ 2.07
U2AF1-203ENST00000398137 C7orf25Q9BPX7 421 aa27.98■■■□□ 2.07
U2AF1-203ENST00000398137 NFKBIZQ9BYH8 718 aa27.98■■■□□ 2.07
U2AF1-203ENST00000398137 TMEM117Q9H0C3 514 aa27.98■■■□□ 2.07
U2AF1-203ENST00000398137 C2orf40Q9H1Z8 148 aa27.98■■■□□ 2.07
U2AF1-203ENST00000398137 RNF216Q9NWF9 866 aaPredicted RBP27.98■■■□□ 2.07
U2AF1-203ENST00000398137 LARSQ9P2J5 1176 aaKnown RBP27.98■■■□□ 2.07
U2AF1-203ENST00000398137 GOLGA6L22H0YM25 854 aa27.97■■■□□ 2.07
U2AF1-203ENST00000398137 TBX10O75333 385 aa27.97■■■□□ 2.07
U2AF1-203ENST00000398137 CUL4BQ13620 913 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms