RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 TMPRSS15P98073 1019 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 PTH1RQ03431 593 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 ZNF460Q14592 562 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 PLS1Q14651 629 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 SEPT7Q16181 437 aaKnown RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 PKN3Q6P5Z2 889 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 RTL10Q7L3V2 364 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 EEPD1Q7L9B9 569 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 SPICE1Q8N0Z3 855 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 GRIN3AQ8TCU5 1115 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 INTS4Q96HW7 963 aaKnown RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 DEFB118Q96PH6 123 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 OSMRQ99650 979 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 GTPBP4Q9BZE4 634 aaKnown RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 STARD7Q9NQZ5 370 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 KCND2Q9NZV8 630 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 GPN3Q9UHW5 284 aaPredicted RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 MAPRE3Q9UPY8 281 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 COL4A4P53420 1690 aaPredicted RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 ABHD14A-ACY1A0A1B0GW23 586 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 RNF223E7ERA6 249 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 KHNYNO15037 678 aaKnown RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 MMP20O60882 483 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 MMP3P08254 477 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 ACRP10323 421 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 PDCP20941 246 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 ID4P47928 161 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 RTP1P59025 263 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 PURAQ00577 322 aaKnown RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 NR5A1Q13285 461 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 STAT4Q14765 748 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 ARSJQ5FYB0 599 aaPredicted RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 RRP12Q5JTH9 1297 aaKnown RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 HGSNATQ68CP4 663 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 VHLLQ6RSH7 139 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 DLK2Q6UY11 383 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 THSD4Q6ZMP0 1018 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 FAM126BQ8IXS8 530 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 CCDC144CPQ8IYA2 1237 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 TCEAL8Q8IYN2 117 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 OR6J1Q8NGC5 347 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 STK35Q8TDR2 534 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 JPH3Q8WXH2 748 aaPredicted RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 KISS1RQ969F8 398 aaPredicted RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 RMDN3Q96TC7 470 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 MXRA8Q9BRK3 442 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 ZCCHC2Q9C0B9 1178 aaKnown RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 FOXP1Q9H334 677 aaPredicted RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 PSTPIP2Q9H939 334 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 IL23AQ9NPF7 189 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 C1orf112Q9NSG2 853 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 FAM86C1Q9NVL1 165 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 PGPEP1Q9NXJ5 209 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 IP6K2Q9UHH9 426 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 PCDHA4Q9UN74 947 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 STXBP3O00186 592 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 ASAP2O43150 1006 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 ZSCAN20P17040 1043 aaPredicted RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 PRPHP41219 470 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 PTGIRP43119 386 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 FPGSQ05932 587 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 ARHGAP1Q07960 439 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 RAPGEF1Q13905 1077 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 BAATQ14032 418 aaPredicted RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 SKOR2Q2VWA4 1001 aaPredicted RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 MIS18BP1Q6P0N0 1132 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 CNKSR3Q6P9H4 555 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 KCTD1Q719H9 257 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 ZBTB46Q86UZ6 589 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 TDHQ8IZJ6 230 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 REXO1Q8N1G1 1221 aaKnown RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 RBBP8NLQ8NC74 664 aaPredicted RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 TRPV1Q8NER1 839 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 MYRIPQ8NFW9 859 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 OR6P1Q8NGX9 317 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 GAL3ST3Q96A11 431 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 NFKBIZQ9BYH8 718 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 GSX2Q9BZM3 304 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 ELAC1Q9H777 363 aaKnown RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 FLRT1Q9NZU1 646 aa4.23□□□□□ -1.73
UBE3A-202ENST00000397954 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.23□□□□□ -1.73
UBE3A-202ENST00000397954 PDCD11Q14690 1871 aaKnown RBP4.22□□□□□ -1.73
UBE3A-202ENST00000397954 SMIM35A0A1B0GVV1 85 aa4.22□□□□□ -1.73
UBE3A-202ENST00000397954 PTPDC1A2A3K4 754 aa4.22□□□□□ -1.73
UBE3A-202ENST00000397954 MBLAC1A4D2B0 266 aaPredicted RBP4.22□□□□□ -1.73
UBE3A-202ENST00000397954 H0YCG3 227 aa4.22□□□□□ -1.73
UBE3A-202ENST00000397954 MEIS1O00470 390 aa4.22□□□□□ -1.73
UBE3A-202ENST00000397954 BAG4O95429 457 aaKnown RBP4.22□□□□□ -1.73
UBE3A-202ENST00000397954 SERPINB3P29508 390 aa4.22□□□□□ -1.73
UBE3A-202ENST00000397954 CCND3P30281 292 aaPredicted RBP4.22□□□□□ -1.73
UBE3A-202ENST00000397954 AXLP30530 894 aa4.22□□□□□ -1.73
UBE3A-202ENST00000397954 ZRSR2Q15696 482 aaKnown RBP4.22□□□□□ -1.73
UBE3A-202ENST00000397954 ACBD5Q5T8D3 534 aaPredicted RBP4.22□□□□□ -1.73
UBE3A-202ENST00000397954 CNTD1Q8N815 330 aa4.22□□□□□ -1.73
UBE3A-202ENST00000397954 CNNM3Q8NE01 707 aa4.22□□□□□ -1.73
UBE3A-202ENST00000397954 USP33Q8TEY7 942 aa4.22□□□□□ -1.73
UBE3A-202ENST00000397954 SEPT1Q8WYJ6 367 aa4.22□□□□□ -1.73
UBE3A-202ENST00000397954 GBF1Q92538 1859 aa4.22□□□□□ -1.73
UBE3A-202ENST00000397954 BORCS6Q96GS4 357 aa4.22□□□□□ -1.73
UBE3A-202ENST00000397954 CEP63Q96MT8 703 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms