RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ZNF200P98182 395 aaPredicted RBP21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 KCNH2Q12809 1159 aa21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 BFSP1Q12934 665 aa21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 AMHR2Q16671 573 aa21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 TAF2Q6P1X5 1199 aa21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 TSHZ1Q6ZSZ6 1077 aa21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 SRGAP1Q7Z6B7 1085 aa21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 NME8Q8N427 588 aa21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 ZSWIM2Q8NEG5 633 aa21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 HAPLN2Q9GZV7 340 aa21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 KIAA1586Q9HCI6 787 aa21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 PTPRHQ9HD43 1115 aa21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 SIK3Q9Y2K2 1263 aa21.26■□□□□ 0.99
PDLIM2-205ENST00000397761 CNTNAP2Q9UHC6 1331 aa21.25■□□□□ 0.99
PDLIM2-205ENST00000397761 INO80B-WBP1J3KQ70 363 aa21.25■□□□□ 0.99
PDLIM2-205ENST00000397761 HSP90AA2PQ14568 343 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-205ENST00000397761 SNRNP35Q16560 246 aaKnown RBP21.25■□□□□ 0.99
PDLIM2-205ENST00000397761 GPD1LQ8N335 351 aa21.25■□□□□ 0.99
PDLIM2-205ENST00000397761 SH3TC2Q8TF17 1288 aa21.25■□□□□ 0.99
PDLIM2-205ENST00000397761 MFSD14AQ96MC6 490 aa21.25■□□□□ 0.99
PDLIM2-205ENST00000397761 INO80BQ9C086 356 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-205ENST00000397761 FAM49AQ9H0Q0 323 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-205ENST00000397761 PAK6Q9NQU5 681 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-205ENST00000397761 USP20Q9Y2K6 914 aa21.25■□□□□ 0.99
PDLIM2-205ENST00000397761 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.25■□□□□ 0.99
PDLIM2-205ENST00000397761 GTPBP10A4D1E9 387 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 PES1O00541 588 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 EXTL3O43909 919 aa21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 AFPP02771 609 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 ADRB2P07550 413 aa21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 PTPN11Q06124 597 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 TRIM14Q14142 442 aa21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 PCBP1Q15365 356 aaKnown RBP eCLIP21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 SYCP1Q15431 976 aa21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 FIGNQ5HY92 759 aa21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 GDF6Q6KF10 455 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 CBWD2Q8IUF1 395 aa21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 TRIM44Q96DX7 344 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 ZNF668Q96K58 619 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 ZBTB45Q96K62 511 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 AGO2Q9UKV8 859 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-205ENST00000397761 TRIP11Q15643 1979 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 FAM189A1O60320 539 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 RPLP2P05387 115 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 MCL1Q07820 350 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 PRPF4BQ13523 1007 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 RPAINQ86UA6 219 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 SERINC5Q86VE9 423 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 ARRDC4Q8NCT1 418 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 CCDC150Q8NCX0 1101 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 TMC2Q8TDI7 906 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 DNAJB3Q8WWF6 145 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 NLRP7Q8WX94 980 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 IQCDQ96DY2 449 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 SAAL1Q96ER3 474 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 TTYH3Q9C0H2 523 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 UNC93B1Q9H1C4 597 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 TNFSF13BQ9Y275 285 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 RALGAPA2Q2PPJ7 1873 aa21.23■□□□□ 0.99
PDLIM2-205ENST00000397761 DNAH12Q6ZR08 3092 aa21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 GOLGA8IPA6NC78 632 aa21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 GOLGA8JA6NMD2 632 aa21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 LDHAP00338 332 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 GYPCP04921 128 aa21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 KRT13P13646 458 aa21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 KCNMA1Q12791 1236 aa21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 C1orf220Q5T0J3 134 aa21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 CRELD2Q6UXH1 353 aaPredicted RBP21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 PLEKHO2Q8TD55 490 aa21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 CACTINQ8WUQ7 758 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 MSTO1Q9BUK6 570 aa21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 GCOM2Q9BZD3 368 aaPredicted RBP21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 MCOLN1Q9GZU1 580 aa21.22■□□□□ 0.99
PDLIM2-205ENST00000397761 PMM2O15305 246 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 CLDN3O15551 220 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 B4GALT5O43286 388 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 VAMP7P51809 220 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 CYP24A1Q07973 514 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 KIZQ2M2Z5 673 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 DCAF17Q5H9S7 520 aaPredicted RBP21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 ATF7IP2Q5U623 682 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 MPZL3Q6UWV2 235 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 LRRC8AQ8IWT6 810 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 RDH13Q8NBN7 331 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 PARD3BQ8TEW8 1205 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 ABHD8Q96I13 439 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 NUP58Q9BVL2 599 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 KCNF1Q9H3M0 494 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 PHF24Q9UPV7 400 aa21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 PDCD11Q14690 1871 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-205ENST00000397761 ZNF233A6NK53 670 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 DARSP14868 501 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 RBL2Q08999 1139 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 ITGA7Q13683 1181 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 ARID5BQ14865 1188 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 SLC9C1Q4G0N8 1177 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 CCDC155Q8N6L0 562 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 TC2NQ8N9U0 490 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 SLC43A3Q8NBI5 491 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 PPP1R16BQ96T49 567 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms