RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 TNFSF13BQ9Y275 285 aa25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 CLIC2O15247 247 aa25.76■■□□□ 1.71
TSPAN4-202ENST00000397396 TPM2P07951 284 aa25.76■■□□□ 1.71
TSPAN4-202ENST00000397396 EPB41P11171 864 aaKnown RBP25.76■■□□□ 1.71
TSPAN4-202ENST00000397396 FAM43BQ6ZT52 329 aaPredicted RBP25.76■■□□□ 1.71
TSPAN4-202ENST00000397396 XXYLT1Q8NBI6 393 aa25.76■■□□□ 1.71
TSPAN4-202ENST00000397396 WNT8BQ93098 351 aa25.76■■□□□ 1.71
TSPAN4-202ENST00000397396 METTL14Q9HCE5 456 aaKnown RBP25.76■■□□□ 1.71
TSPAN4-202ENST00000397396 SAMSN1Q9NSI8 373 aaKnown RBP25.76■■□□□ 1.71
TSPAN4-202ENST00000397396 CENPFP49454 3210 aa25.76■■□□□ 1.71
TSPAN4-202ENST00000397396 N4BP3O15049 544 aa25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 MAPK13O15264 365 aa25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 CLDN3O15551 220 aa25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 TSPAN1O60635 241 aa25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 EXOC3O60645 756 aa25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 CTSHP09668 335 aa25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 PSMC2P35998 433 aaKnown RBP25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 MATR3P43243 847 aaKnown RBP eCLIP25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 ATN1P54259 1190 aaPredicted RBP25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 AMHR2Q16671 573 aa25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 MPZL3Q6UWV2 235 aa25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 DIS3LQ8TF46 1054 aaKnown RBP25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 CCDC51Q96ER9 411 aa25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 PAWRQ96IZ0 340 aaKnown RBP25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 ADPGKQ9BRR6 497 aa25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 HSPBP1Q9NZL4 362 aa25.75■■□□□ 1.71
TSPAN4-202ENST00000397396 KCNJ18B7U540 433 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 ANKRD63C9JTQ0 380 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 PITPNM1O00562 1244 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 PQBP1O60828 265 aaKnown RBP25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 CKBP12277 381 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 CYP2J2P51589 502 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 MARSP56192 900 aaKnown RBP25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 KCNJ12Q14500 433 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 KYAT1Q16773 422 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 CCDC40Q4G0X9 1142 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 SLC39A4Q6P5W5 647 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 CNOT6LQ96LI5 555 aaKnown RBP25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 CBWD1Q9BRT8 395 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 TCHPQ9BT92 498 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 HSD3B7Q9H2F3 369 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 ANKFY1Q9P2R3 1169 aa25.74■■□□□ 1.71
TSPAN4-202ENST00000397396 GPR182O15218 404 aa25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 RPS6KA5O75582 802 aa25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 PARNO95453 639 aaKnown RBP25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 MCL1Q07820 350 aa25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 NOLC1Q14978 699 aaKnown RBP eCLIP25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 ZNF568Q3ZCX4 644 aa25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 TCP11X2Q5H9J9 407 aa25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 CEP135Q66GS9 1140 aa25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 NOTUMQ6P988 496 aa25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 SARM1Q6SZW1 724 aa25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 FRMD5Q7Z6J6 570 aa25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 ANP32BQ92688 251 aaKnown RBP25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 CDHR5Q9HBB8 845 aa25.73■■□□□ 1.71
TSPAN4-202ENST00000397396 CHRNA1P02708 482 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 TPM3P06753 285 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 IQCF3P0C7M6 154 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 PRKCSHP14314 528 aaPredicted RBP25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 SELPP16109 830 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 PROZP22891 400 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 ADSSP30520 456 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 PPP2R3AQ06190 1150 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 DCAF4L1Q3SXM0 396 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 TRIM60Q495X7 471 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 USP37Q86T82 979 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 GPD1LQ8N335 351 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 TMEM40Q8WWA1 233 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 MSTO1Q9BUK6 570 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 IKZF4Q9H2S9 585 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 AGPAT5Q9NUQ2 364 aa25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 AGO2Q9UKV8 859 aaKnown RBP25.72■■□□□ 1.71
TSPAN4-202ENST00000397396 A0A0B4J269 797 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 B4GALT5O43286 388 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 CBFA2T2O43439 604 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 EXTL3O43909 919 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 SERPINC1P01008 464 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 EDN1P05305 212 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 MCF2P10911 925 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 ARF4P18085 180 aaPredicted RBP25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 FILIP1LQ4L180 1135 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 FBXO47Q5MNV8 452 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 ZNF618Q5T7W0 954 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 LRRC8DQ7L1W4 858 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 FAM186BQ8IYM0 893 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 PCIF1Q9H4Z3 704 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 PTPRHQ9HD43 1115 aa25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 ARMCX3Q9UH62 379 aaPredicted RBP25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 LIMA1Q9UHB6 759 aaKnown RBP25.71■■□□□ 1.71
TSPAN4-202ENST00000397396 A0A1B0GUA9 196 aa25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 TISP43B9A030 160 aa25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 CSDE1O75534 798 aaKnown RBP25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 AKAP3O75969 853 aa25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 MTIF2P46199 727 aaKnown RBP25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 PLCB2Q00722 1185 aa25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 ENPEPQ07075 957 aa25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 INTS8Q75QN2 995 aaKnown RBP25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 FAM228AQ86W67 206 aa25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 IRF2BP1Q8IU81 584 aa25.7■■□□□ 1.71
TSPAN4-202ENST00000397396 FBXL18Q96ME1 805 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms