RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 STK39Q9UEW8 545 aa10.64□□□□□ -0.71
NEDD9-203ENST00000397378 AKT3Q9Y243 479 aa10.64□□□□□ -0.71
NEDD9-203ENST00000397378 MRPS17Q9Y2R5 130 aaKnown RBP10.64□□□□□ -0.71
NEDD9-203ENST00000397378 ZFP37Q9Y6Q3 630 aaPredicted RBP10.64□□□□□ -0.71
NEDD9-203ENST00000397378 GCN1Q92616 2671 aaKnown RBP10.64□□□□□ -0.71
NEDD9-203ENST00000397378 GREB1Q4ZG55 1949 aa10.64□□□□□ -0.71
NEDD9-203ENST00000397378 SMCO2A6NFE2 343 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 PSAPP07602 524 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 TDGF1P13385 188 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 DARSP14868 501 aaKnown RBP10.63□□□□□ -0.71
NEDD9-203ENST00000397378 FSHRP23945 695 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 SLC11A1P49279 550 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 GPC3P51654 580 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 ADCY1Q08828 1119 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 SRSF5Q13243 272 aaKnown RBP10.63□□□□□ -0.71
NEDD9-203ENST00000397378 CCDC6Q16204 474 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 STPG1Q5TH74 334 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 ZNF852Q6ZMS4 543 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 CHST12Q9NRB3 414 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 RXFP3Q9NSD7 469 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 RBM28Q9NW13 759 aaKnown RBP10.63□□□□□ -0.71
NEDD9-203ENST00000397378 NDRG2Q9UN36 371 aaKnown RBP10.63□□□□□ -0.71
NEDD9-203ENST00000397378 PCDHA10Q9Y5I2 948 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 DOCK6Q96HP0 2047 aa10.63□□□□□ -0.71
NEDD9-203ENST00000397378 TEX28O15482 410 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 LILRB3O75022 631 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 CCR3P51677 355 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 SETQ01105 290 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-203ENST00000397378 FUT2Q10981 343 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 NOMO2Q5JPE7 1267 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 GLB1LQ6UWU2 654 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 TRMT1LQ7Z2T5 733 aaKnown RBP10.62□□□□□ -0.71
NEDD9-203ENST00000397378 MICU3Q86XE3 530 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 RAB11FIP4Q86YS3 637 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 LRRC71Q8N4P6 559 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 FAM160A2Q8N612 972 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-203ENST00000397378 LPPQ93052 612 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 ZNF668Q96K58 619 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-203ENST00000397378 SCLT1Q96NL6 688 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 RPS6KC1Q96S38 1066 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 KXD1Q9BQD3 176 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 ZNF577Q9BSK1 485 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 PHF20Q9BVI0 1012 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 LSM14BQ9BX40 385 aaKnown RBP10.62□□□□□ -0.71
NEDD9-203ENST00000397378 TMEM121BQ9BXQ6 578 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-203ENST00000397378 NT5C3AQ9H0P0 336 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 BARHL2Q9NY43 387 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 GABBR1Q9UBS5 961 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 CDH7Q9ULB5 785 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 SSX2IPQ9Y2D8 614 aa10.62□□□□□ -0.71
NEDD9-203ENST00000397378 TDRD15B5MCY1 1934 aaKnown RBP10.62□□□□□ -0.71
NEDD9-203ENST00000397378 IGF2RP11717 2491 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 CHURC1-FNTBB4DL54 471 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 HRO43593 1189 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 ZNF862O60290 1169 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 SKIP12755 728 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 FGFR4P22455 802 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 PHKA2P46019 1235 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 FNTBP49356 437 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 NOVA1P51513 510 aaKnown RBP10.61□□□□□ -0.71
NEDD9-203ENST00000397378 CDC42EP1Q00587 391 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 ZNF252P-AS1Q0IIN9 211 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 APOA5Q6Q788 366 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 SYNE3Q6ZMZ3 975 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 CEP68Q76N32 757 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 PALB2Q86YC2 1186 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 PRKD2Q9BZL6 878 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 ARRDC1-AS1Q9H2J1 176 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 CHRDQ9H2X0 955 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 PLEKHA4Q9H4M7 779 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 HEBP1Q9NRV9 189 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 NRBP2Q9NSY0 501 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 ZDHHC7Q9NXF8 308 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 TCEAL9Q9UHQ7 104 aa10.61□□□□□ -0.71
NEDD9-203ENST00000397378 NBEAQ8NFP9 2946 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 WDR64B1ANS9 1081 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 AXIN1O15169 862 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 GAS2O43903 313 aaKnown RBP10.6□□□□□ -0.71
NEDD9-203ENST00000397378 ZNF623O75123 536 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 SOD2P04179 222 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 OATP04181 439 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 CNR2P34972 360 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 FZD5Q13467 585 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 SOWAHCQ53LP3 525 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-203ENST00000397378 JAKMIP3Q5VZ66 844 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 GRASPQ7Z6J2 395 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-203ENST00000397378 ZNF280BQ86YH2 543 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 GLYCTKQ8IVS8 523 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 HDAC7Q8WUI4 952 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 NLRP7Q8WX94 980 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 GATA6Q92908 595 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 FGF13Q92913 245 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 FAM193BQ96PV7 902 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-203ENST00000397378 LRRC2Q9BYS8 371 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 GCOM2Q9BZD3 368 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-203ENST00000397378 FAN1Q9Y2M0 1017 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 V9GY48 417 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-203ENST00000397378 LOC400499M0QZD8 3231 aa10.6□□□□□ -0.71
NEDD9-203ENST00000397378 ADAMTS20P59510 1910 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 ESYT2A0FGR8 921 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms