RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TMEM119Q4V9L6 283 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 C1orf186Q6ZWK4 172 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 SLC39A11Q8N1S5 342 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 NRDE2Q9H7Z3 1164 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 GIT1Q9Y2X7 761 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 TCHHQ07283 1943 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 PLXNA4Q9HCM2 1894 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 FSD2A1L4K1 749 aa16.05■□□□□ 0.16
SEC13-208ENST00000397109 HIP1RO75146 1068 aa16.05■□□□□ 0.16
SEC13-208ENST00000397109 ZC3H11AO75152 810 aaKnown RBP eCLIP16.05■□□□□ 0.16
SEC13-208ENST00000397109 CSPG5O95196 566 aa16.05■□□□□ 0.16
SEC13-208ENST00000397109 SSBP05455 408 aaKnown RBP eCLIP16.05■□□□□ 0.16
SEC13-208ENST00000397109 KCNA5P22460 613 aa16.05■□□□□ 0.16
SEC13-208ENST00000397109 HYAL1Q12794 435 aa16.05■□□□□ 0.16
SEC13-208ENST00000397109 DMP1Q13316 513 aaPredicted RBP16.05■□□□□ 0.16
SEC13-208ENST00000397109 PRPF4BQ13523 1007 aaKnown RBP16.05■□□□□ 0.16
SEC13-208ENST00000397109 BMS1Q14692 1282 aaKnown RBP16.05■□□□□ 0.16
SEC13-208ENST00000397109 LEXMQ3ZCV2 418 aa16.05■□□□□ 0.16
SEC13-208ENST00000397109 TMEM169Q96HH4 297 aa16.05■□□□□ 0.16
SEC13-208ENST00000397109 FAM193BQ96PV7 902 aaPredicted RBP16.05■□□□□ 0.16
SEC13-208ENST00000397109 RUSC1Q9BVN2 902 aa16.05■□□□□ 0.16
SEC13-208ENST00000397109 CCDC113Q9H0I3 377 aa16.05■□□□□ 0.16
SEC13-208ENST00000397109 NGRNQ9NPE2 291 aaKnown RBP16.05■□□□□ 0.16
SEC13-208ENST00000397109 CLIC4Q9Y696 253 aa16.05■□□□□ 0.16
SEC13-208ENST00000397109 ATG2AQ2TAZ0 1938 aa16.05■□□□□ 0.16
SEC13-208ENST00000397109 ZMYM2Q9UBW7 1377 aa16.05■□□□□ 0.16
SEC13-208ENST00000397109 CCDC169A6NNP5 214 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 K7ERI5 159 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 INPPL1O15357 1258 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 NPTXRO95502 500 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 PLA2G4BP0C869 781 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 IRS1P35568 1242 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 PEX3P56589 373 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 PTPAQ15257 358 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 CTC1Q2NKJ3 1217 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 PUS10Q3MIT2 529 aaKnown RBP16.04■□□□□ 0.16
SEC13-208ENST00000397109 EP400NLQ6ZTU2 488 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 DAW1Q8N136 415 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 PLIN2Q99541 437 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 CDCA3Q99618 268 aaPredicted RBP16.04■□□□□ 0.16
SEC13-208ENST00000397109 ADPGKQ9BRR6 497 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 TLE6Q9H808 572 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 POLD4Q9HCU8 107 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 CLDND1Q9NY35 253 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 STK39Q9UEW8 545 aa16.04■□□□□ 0.16
SEC13-208ENST00000397109 MORC2Q9Y6X9 1032 aaPredicted RBP16.04■□□□□ 0.16
SEC13-208ENST00000397109 FSCN2O14926 492 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 ALDH2P05091 517 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 GALTP07902 379 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 PBX3P40426 434 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 NPTX2P47972 431 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 KCNQ1P51787 676 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 SLC12A3P55017 1021 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 ERVFC1P60507 584 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 ATL3Q6DD88 541 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 TMC7Q7Z402 723 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 APBB1IPQ7Z5R6 666 aaPredicted RBP16.03■□□□□ 0.16
SEC13-208ENST00000397109 RASSF8Q8NHQ8 419 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 ADAMTS19Q8TE59 1207 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 TMEM175Q9BSA9 504 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 CCSER1Q9C0I3 900 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 GBP3Q9H0R5 595 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 IGFLR1Q9H665 355 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 TMEM134Q9H6X4 195 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 KMT5AQ9NQR1 393 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 ENTPD7Q9NQZ7 604 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 HES2Q9Y543 173 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 SRPRBQ9Y5M8 271 aaKnown RBP16.03■□□□□ 0.16
SEC13-208ENST00000397109 TCF20Q9UGU0 1960 aaKnown RBP16.03■□□□□ 0.16
SEC13-208ENST00000397109 SPTBN5Q9NRC6 3674 aaKnown RBP16.03■□□□□ 0.16
SEC13-208ENST00000397109 ARL5CA6NH57 179 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 NT5C1B-RDH14C9J2C7 533 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 LIG1P18858 919 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 SMTNP53814 917 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 MAPK7Q13164 816 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 ADAM15Q13444 863 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 FAM173BQ6P4H8 233 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 CDR2LQ86X02 465 aaPredicted RBP16.03■□□□□ 0.16
SEC13-208ENST00000397109 EFHBQ8N7U6 833 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 IGSF21Q96ID5 467 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 UHRF1Q96T88 793 aaPredicted RBP16.03■□□□□ 0.16
SEC13-208ENST00000397109 GAD1Q99259 594 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 TCF25Q9BQ70 676 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 NTPCRQ9BSD7 190 aaKnown RBP16.03■□□□□ 0.16
SEC13-208ENST00000397109 KIFC3Q9BVG8 833 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 APOL6Q9BWW8 343 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 NXF3Q9H4D5 531 aaKnown RBP16.03■□□□□ 0.16
SEC13-208ENST00000397109 PDZD7Q9H5P4 517 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 FAM50BQ9Y247 325 aa16.03■□□□□ 0.16
SEC13-208ENST00000397109 DDHD2O94830 711 aa16.02■□□□□ 0.15
SEC13-208ENST00000397109 POMCP01189 267 aa16.02■□□□□ 0.15
SEC13-208ENST00000397109 MARCKSP29966 332 aaPredicted RBP16.02■□□□□ 0.15
SEC13-208ENST00000397109 MLH1P40692 756 aa16.02■□□□□ 0.15
SEC13-208ENST00000397109 NRIP1P48552 1158 aa16.02■□□□□ 0.15
SEC13-208ENST00000397109 SLC11A1P49279 550 aa16.02■□□□□ 0.15
SEC13-208ENST00000397109 GRIN1Q05586 938 aa16.02■□□□□ 0.15
SEC13-208ENST00000397109 DCAF4L1Q3SXM0 396 aa16.02■□□□□ 0.15
SEC13-208ENST00000397109 PLPP4Q5VZY2 271 aa16.02■□□□□ 0.15
SEC13-208ENST00000397109 ADGRD2Q7Z7M1 963 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms