RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 GLB1LQ6UWU2 654 aa15.21■□□□□ 0.03
SEC13-205ENST00000397101 LRRC71Q8N4P6 559 aa15.21■□□□□ 0.03
SEC13-205ENST00000397101 AUTS2Q8WXX7 1259 aa15.21■□□□□ 0.03
SEC13-205ENST00000397101 RMDN1Q96DB5 314 aa15.21■□□□□ 0.03
SEC13-205ENST00000397101 BORCS6Q96GS4 357 aa15.21■□□□□ 0.03
SEC13-205ENST00000397101 SPATA32Q96LK8 384 aa15.21■□□□□ 0.03
SEC13-205ENST00000397101 GCOM2Q9BZD3 368 aaPredicted RBP15.21■□□□□ 0.03
SEC13-205ENST00000397101 TBC1D13Q9NVG8 400 aa15.21■□□□□ 0.03
SEC13-205ENST00000397101 DPP7Q9UHL4 492 aa15.21■□□□□ 0.03
SEC13-205ENST00000397101 MYH9P35579 1960 aaKnown RBP15.21■□□□□ 0.03
SEC13-205ENST00000397101 EP300Q09472 2414 aaPredicted RBP15.21■□□□□ 0.02
SEC13-205ENST00000397101 ZNF862O60290 1169 aa15.2■□□□□ 0.02
SEC13-205ENST00000397101 C1RP00736 705 aa15.2■□□□□ 0.02
SEC13-205ENST00000397101 RAB27AP51159 221 aa15.2■□□□□ 0.02
SEC13-205ENST00000397101 TARBP2Q15633 366 aaKnown RBP15.2■□□□□ 0.02
SEC13-205ENST00000397101 NOMO2Q5JPE7 1267 aa15.2■□□□□ 0.02
SEC13-205ENST00000397101 ZC3H14Q6PJT7 736 aaKnown RBP15.2■□□□□ 0.02
SEC13-205ENST00000397101 DGLUCYQ7Z3D6 616 aa15.2■□□□□ 0.02
SEC13-205ENST00000397101 NLRP7Q8WX94 980 aa15.2■□□□□ 0.02
SEC13-205ENST00000397101 STAMQ92783 540 aa15.2■□□□□ 0.02
SEC13-205ENST00000397101 KLHL5Q96PQ7 755 aa15.2■□□□□ 0.02
SEC13-205ENST00000397101 INO80BQ9C086 356 aaPredicted RBP15.2■□□□□ 0.02
SEC13-205ENST00000397101 SCAND2PQ9GZW5 306 aaPredicted RBP15.2■□□□□ 0.02
SEC13-205ENST00000397101 GDPD2Q9HCC8 539 aa15.2■□□□□ 0.02
SEC13-205ENST00000397101 EPS15L1Q9UBC2 864 aa15.2■□□□□ 0.02
SEC13-205ENST00000397101 NEMFO60524 1076 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 OFD1O75665 1012 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 TDP2O95551 362 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 BMP15O95972 392 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 GCFC2P16383 781 aaKnown RBP15.19■□□□□ 0.02
SEC13-205ENST00000397101 SFPQP23246 707 aaKnown RBP eCLIP15.19■□□□□ 0.02
SEC13-205ENST00000397101 TBC1D8BQ0IIM8 1120 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 PHLDB3Q6NSJ2 640 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 ZNF410Q86VK4 478 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 BCL7CQ8WUZ0 217 aaPredicted RBP15.19■□□□□ 0.02
SEC13-205ENST00000397101 SCLT1Q96NL6 688 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 TMEM175Q9BSA9 504 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 VN1R3Q9BXE9 311 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 WDR6Q9NNW5 1121 aaKnown RBP15.19■□□□□ 0.02
SEC13-205ENST00000397101 DISC1Q9NRI5 854 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 FAM105AQ9NUU6 356 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 DLL3Q9NYJ7 618 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 DDX25Q9UHL0 483 aaKnown RBP15.19■□□□□ 0.02
SEC13-205ENST00000397101 SSX2IPQ9Y2D8 614 aa15.19■□□□□ 0.02
SEC13-205ENST00000397101 IGKV6-21A0A0C4DH24 114 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 KRBA1A5PL33 1030 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 GOLGA6L4A6NEF3 574 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 SPTLC2O15270 562 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 YEATS4O95619 227 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 CNPP09543 421 aaKnown RBP15.18■□□□□ 0.02
SEC13-205ENST00000397101 SRFP11831 508 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 FGFR4P22455 802 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 KLRC2P26717 231 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 SFNP31947 248 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 PRKCEQ02156 737 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 PRR16Q569H4 304 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 TWF2Q6IBS0 349 aaKnown RBP15.18■□□□□ 0.02
SEC13-205ENST00000397101 ELMSAN1Q6PJG2 1045 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 TRMT1LQ7Z2T5 733 aaKnown RBP15.18■□□□□ 0.02
SEC13-205ENST00000397101 RDM1Q8NG50 284 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 KCNG4Q8TDN1 519 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 LENG9Q96B70 501 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 PGBD4Q96DM1 585 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 NIFKQ9BYG3 293 aaKnown RBP15.18■□□□□ 0.02
SEC13-205ENST00000397101 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.18■□□□□ 0.02
SEC13-205ENST00000397101 KANSL3Q9P2N6 904 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 SAMM50Q9Y512 469 aa15.18■□□□□ 0.02
SEC13-205ENST00000397101 MED19A0JLT2 244 aaPredicted RBP15.17■□□□□ 0.02
SEC13-205ENST00000397101 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
SEC13-205ENST00000397101 WNT7AO00755 349 aa15.17■□□□□ 0.02
SEC13-205ENST00000397101 MARCKSP29966 332 aaPredicted RBP15.17■□□□□ 0.02
SEC13-205ENST00000397101 ME1P48163 572 aa15.17■□□□□ 0.02
SEC13-205ENST00000397101 SLC11A1P49279 550 aa15.17■□□□□ 0.02
SEC13-205ENST00000397101 NASPP49321 788 aaPredicted RBP15.17■□□□□ 0.02
SEC13-205ENST00000397101 RNASELQ05823 741 aaKnown RBP15.17■□□□□ 0.02
SEC13-205ENST00000397101 PTGDRQ13258 359 aa15.17■□□□□ 0.02
SEC13-205ENST00000397101 ORC2Q13416 577 aaPredicted RBP15.17■□□□□ 0.02
SEC13-205ENST00000397101 CALCRLQ16602 461 aa15.17■□□□□ 0.02
SEC13-205ENST00000397101 PPP4R3AQ6IN85 833 aa15.17■□□□□ 0.02
SEC13-205ENST00000397101 FEZF2Q8TBJ5 459 aa15.17■□□□□ 0.02
SEC13-205ENST00000397101 HDAC7Q8WUI4 952 aa15.17■□□□□ 0.02
SEC13-205ENST00000397101 ZNF668Q96K58 619 aaPredicted RBP15.17■□□□□ 0.02
SEC13-205ENST00000397101 CEP89Q96ST8 783 aa15.17■□□□□ 0.02
SEC13-205ENST00000397101 RIT2Q99578 217 aa15.17■□□□□ 0.02
SEC13-205ENST00000397101 MRPL17Q9NRX2 175 aaKnown RBP15.17■□□□□ 0.02
SEC13-205ENST00000397101 DLGAP2Q9P1A6 1054 aa15.17■□□□□ 0.02
SEC13-205ENST00000397101 ZFHX4Q86UP3 3567 aa15.16■□□□□ 0.02
SEC13-205ENST00000397101 NARSO43776 548 aaKnown RBP15.16■□□□□ 0.02
SEC13-205ENST00000397101 N4BP1O75113 896 aaKnown RBP15.16■□□□□ 0.02
SEC13-205ENST00000397101 PRPF40AO75400 957 aaKnown RBP15.16■□□□□ 0.02
SEC13-205ENST00000397101 SOD2P04179 222 aa15.16■□□□□ 0.02
SEC13-205ENST00000397101 ALDH2P05091 517 aa15.16■□□□□ 0.02
SEC13-205ENST00000397101 DNM2P50570 870 aa15.16■□□□□ 0.02
SEC13-205ENST00000397101 JAK3P52333 1124 aa15.16■□□□□ 0.02
SEC13-205ENST00000397101 SLC39A14Q15043 492 aa15.16■□□□□ 0.02
SEC13-205ENST00000397101 MOXD1Q6UVY6 613 aa15.16■□□□□ 0.02
SEC13-205ENST00000397101 POTEDQ86YR6 584 aa15.16■□□□□ 0.02
SEC13-205ENST00000397101 SLC44A3Q8N4M1 653 aa15.16■□□□□ 0.02
SEC13-205ENST00000397101 LINC00301Q8NCQ3 95 aa15.16■□□□□ 0.02
SEC13-205ENST00000397101 URGCPQ8TCY9 931 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms