RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 STK25O00506 426 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 DDX3XO00571 662 aaKnown RBP eCLIP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 ZMYND10O75800 440 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 GCNT3O95395 438 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 LSM8O95777 96 aaKnown RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 NUDT17P0C025 328 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 POLD1P28340 1107 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 YWHABP31946 246 aaKnown RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 CTNNA1P35221 906 aaKnown RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 PTK2Q05397 1052 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 CTTNQ14247 550 aaKnown RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 SUPT20HL1Q3ZLR7 823 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 EAPPQ56P03 285 aaPredicted RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 DNAJC21Q5F1R6 531 aaKnown RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 LRRC38Q5VT99 294 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 MIS18BP1Q6P0N0 1132 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 ARMC9Q7Z3E5 817 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 CENPHQ9H3R5 247 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 DHX33Q9H6R0 707 aaKnown RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 TMEM51Q9NW97 253 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 TBX20Q9UMR3 447 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 HMGB1P1B2RPK0 211 aaPredicted RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 SMAPO00193 183 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 ENC1O14682 589 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 EXTL3O43909 919 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 FAM155BO75949 473 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 SYF2O95926 243 aaKnown RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 ARP10275 920 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 TBXAS1P24557 533 aaPredicted RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 STAT3P40763 770 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 ECE1P42892 770 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 RNASE9P60153 205 aaKnown RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 PLS1Q14651 629 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 TNFAIP8L3Q5GJ75 292 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 CFAP58Q5T655 872 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 KDM7AQ6ZMT4 941 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 YTHDF3Q7Z739 585 aaKnown RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 IQCKQ8N0W5 287 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 LRRC45Q96CN5 670 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 AGPAT1Q99943 283 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 TEX13BQ9BXU2 312 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 CCDC113Q9H0I3 377 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 COL20A1Q9P218 1284 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 A0A087X0T9 212 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 PODXLO00592 558 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 ERBB2P04626 1255 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 SUPT20HL2P0C7V6 817 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 FAM228BP0C875 321 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 TSHRP16473 764 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 INPP5BP32019 993 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 ZNF132P52740 706 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 RBM5P52756 815 aaKnown RBP eCLIP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 EFNA5P52803 228 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 PABPC4Q13310 644 aaKnown RBP eCLIP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 RAPGEF1Q13905 1077 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 COG2Q14746 738 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 ALKBH5Q6P6C2 394 aaKnown RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 POTEHQ6S545 545 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 CLEC10AQ8IUN9 316 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 NIPA2Q8N8Q9 360 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 LNX1Q8TBB1 728 aaPredicted RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 JDP2Q8WYK2 163 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 USP6NLQ92738 828 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 P3H4Q92791 437 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 KLRG1Q96E93 195 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 RAB17Q9H0T7 212 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 TAF1DQ9H5J8 278 aaPredicted RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 CCDC134Q9H6E4 229 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 CWC15Q9P013 229 aaKnown RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 WRAP73Q9P2S5 460 aaPredicted RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 TFR2Q9UP52 801 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 MYH9P35579 1960 aaKnown RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 PATJQ8NI35 1801 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 A0A0G2JLL6 359 aaPredicted RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 MACROD2A1Z1Q3 448 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 ANKRD65E5RJM6 399 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 C21orf2O43822 256 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 PPFIA2O75334 1257 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 CYP1A1P04798 512 aaPredicted RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 OAS2P29728 719 aaKnown RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 CHRNA3P32297 505 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 PSEN1P49768 467 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 COPS2P61201 443 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 RPS6KA1Q15418 735 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 HSP90B2PQ58FF3 399 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 KRT39Q6A163 491 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 RNF207Q6ZRF8 634 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 MAATS1Q7Z4T9 603 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 PRRT2Q7Z6L0 340 aaPredicted RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 MYCT1Q8N699 235 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 NOA1Q8NC60 698 aaKnown RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 CCDC26Q8TAB7 109 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 ATP6V0A4Q9HBG4 840 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 FAM207AQ9NSI2 230 aaPredicted RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 FETUBQ9UGM5 382 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 PDE2AO00408 941 aaPredicted RBP6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 ASAP2O43150 1006 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 PROZP22891 400 aa6.49□□□□□ -1.37
RAPGEF4-203ENST00000397087 CENPCQ03188 943 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms