RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 TYK2P29597 1187 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 PEX19P40855 299 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 ZNF445P59923 1031 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 HPCAP84074 193 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 EFTUD2Q15029 972 aaKnown RBP eCLIP7.62□□□□□ -1.192e-8■■■■□ 24.4
UPF2-203ENST00000397053 AARS2Q5JTZ9 985 aaKnown RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 C6orf10Q5SRN2 563 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 ARL6IP4Q66PJ3 421 aaKnown RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 ERAP2Q6P179 960 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 CDKL3Q8IVW4 592 aaPredicted RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 DCP1BQ8IZD4 617 aaKnown RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 B4GALNT2Q8NHY0 566 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 SLITRK1Q96PX8 696 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 TEX13BQ9BXU2 312 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 TRIM4Q9C037 500 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 RPAP3Q9H6T3 665 aaPredicted RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 MRPL40Q9NQ50 206 aaKnown RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 POLR3EQ9NVU0 708 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 NFKBIL1Q9UBC1 381 aaPredicted RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 ANGPTL2Q9UKU9 493 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 TTC7AQ9ULT0 858 aaPredicted RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 TRIM33Q9UPN9 1127 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 LRRIQ3A6PVS8 624 aaPredicted RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 GGPS1O95749 300 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 GUCA1CO95843 209 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 DARSP14868 501 aaKnown RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 LIFRP42702 1097 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 TPI1P60174 286 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 SREBF2Q12772 1141 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 KCNB1Q14721 858 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 WDR72Q3MJ13 1102 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 SPDYAQ5MJ70 313 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 VMP1Q96GC9 406 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 DYDC2Q96IM9 177 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 NUDT12Q9BQG2 462 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 AP1M1Q9BXS5 423 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 ZMYND12Q9H0C1 365 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 PUS7LQ9H0K6 701 aaKnown RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 SPTLC3Q9NUV7 552 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 HERC5Q9UII4 1024 aaKnown RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 SNX9Q9Y5X1 595 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 A0A087WWV3 80 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 LMNAP02545 664 aaKnown RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 NR3C1P04150 777 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 GSNP06396 782 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 LCP1P13796 627 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 KRT4P19013 534 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 GNA15P30679 374 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 ALDH7A1P49419 539 aaKnown RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 SPARCL1Q14515 664 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 RBBP7Q16576 425 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 CYP4A22Q5TCH4 519 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 NUGGCQ68CJ6 796 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 MAGEB10Q96LZ2 347 aaPredicted RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 CNOT10Q9H9A5 744 aaKnown RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 POLD4Q9HCU8 107 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 ZNRF3Q9ULT6 936 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 NOVA2Q9UNW9 492 aaKnown RBP7.62□□□□□ -1.19
UPF2-203ENST00000397053 MAP3K1Q13233 1512 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 ATP10BO94823 1461 aa7.62□□□□□ -1.19
UPF2-203ENST00000397053 CCL15-CCL14A0A0B4J2E2 113 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 PODXLO00592 558 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 STAG3L1P0CL83 205 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 ZFXP17010 805 aaPredicted RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 CDH6P55285 790 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 EIF3BP55884 814 aaKnown RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 KIF23Q02241 960 aaPredicted RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 RBL2Q08999 1139 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 SMAD1Q15797 465 aaKnown RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 CCL15Q16663 113 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 TTLL11Q8NHH1 800 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 TMEM47Q9BQJ4 181 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 THAP9Q9H5L6 903 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 ADA2Q9NZK5 511 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 RWDD2AQ9UIY3 292 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 AGO2Q9UKV8 859 aaKnown RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 PRG3Q9Y2Y8 225 aaPredicted RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 POTEMA6NI47 508 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 LRRC53A6NM62 1247 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 DIAPH2O60879 1101 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 NDUFS3O75489 264 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 IRF1P10914 325 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 IMPDH2P12268 514 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 PPP3CCP48454 512 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 CENPAP49450 140 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 GPC5P78333 572 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 SNCBQ16143 134 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 HS6ST3Q8IZP7 471 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 RABGGTAQ92696 567 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 OSBP2Q969R2 916 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 BRIP1Q9BX63 1249 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 LMBRD1Q9NUN5 540 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 TLR7Q9NYK1 1049 aaKnown RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 TMEM63CQ9P1W3 806 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 AGAP1Q9UPQ3 857 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 C3orf70A6NLC5 250 aaPredicted RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 SH2B2O14492 632 aaPredicted RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 ASAP2O43150 1006 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 HSPA1AP0DMV8 641 aaKnown RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 HSPA1BP0DMV9 641 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms