RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 NOCTQ9UK39 431 aaKnown RBP15.01□□□□□ -0.01
NUP98-204ENST00000397004 PNMA3Q9UL41 463 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 TRIM33Q9UPN9 1127 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 RGS16O15492 202 aaPredicted RBP15□□□□□ -0.01
NUP98-204ENST00000397004 MESDQ14696 234 aa15□□□□□ -0.01
NUP98-204ENST00000397004 ARMC9Q7Z3E5 817 aa15□□□□□ -0.01
NUP98-204ENST00000397004 PRCCQ92733 491 aaPredicted RBP15□□□□□ -0.01
NUP98-204ENST00000397004 TRIM7Q9C029 511 aa15□□□□□ -0.01
NUP98-204ENST00000397004 INTS9Q9NV88 658 aaKnown RBP15□□□□□ -0.01
NUP98-204ENST00000397004 TNS1Q9HBL0 1735 aaKnown RBP15□□□□□ -0.01
NUP98-204ENST00000397004 SNX3O60493 162 aa15□□□□□ -0.01
NUP98-204ENST00000397004 PSEN1P49768 467 aa15□□□□□ -0.01
NUP98-204ENST00000397004 BFSP1Q12934 665 aa15□□□□□ -0.01
NUP98-204ENST00000397004 GALNTL6Q49A17 601 aa15□□□□□ -0.01
NUP98-204ENST00000397004 RPUSD2Q8IZ73 545 aaKnown RBP15□□□□□ -0.01
NUP98-204ENST00000397004 FAM84AQ96KN4 292 aa15□□□□□ -0.01
NUP98-204ENST00000397004 PARVGQ9HBI0 331 aa15□□□□□ -0.01
NUP98-204ENST00000397004 NRXN2Q9P2S2 1712 aa15□□□□□ -0.01
NUP98-204ENST00000397004 MYH11P35749 1972 aa15□□□□□ -0.01
NUP98-204ENST00000397004 CDR1P51861 262 aa15□□□□□ -0.01
NUP98-204ENST00000397004 NCALDP61601 193 aa15□□□□□ -0.01
NUP98-204ENST00000397004 MYL7Q01449 175 aa15□□□□□ -0.01
NUP98-204ENST00000397004 DAB2IPQ5VWQ8 1189 aa15□□□□□ -0.01
NUP98-204ENST00000397004 TRPM8Q7Z2W7 1104 aa15□□□□□ -0.01
NUP98-204ENST00000397004 SLC47A2Q86VL8 602 aa15□□□□□ -0.01
NUP98-204ENST00000397004 KREMEN1Q96MU8 473 aa15□□□□□ -0.01
NUP98-204ENST00000397004 CBWD1Q9BRT8 395 aa15□□□□□ -0.01
NUP98-204ENST00000397004 DNAJC17Q9NVM6 304 aaKnown RBP15□□□□□ -0.01
NUP98-204ENST00000397004 CNOT7Q9UIV1 285 aaKnown RBP15□□□□□ -0.01
NUP98-204ENST00000397004 SUFUQ9UMX1 484 aa15□□□□□ -0.01
NUP98-204ENST00000397004 FAM13AO94988 1023 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 RPSAP08865 295 aaKnown RBP14.99□□□□□ -0.01
NUP98-204ENST00000397004 IVDP26440 423 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 HOXA10P31260 410 aaPredicted RBP14.99□□□□□ -0.01
NUP98-204ENST00000397004 CYP1B1Q16678 543 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 TMEM63BQ5T3F8 832 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 MAEAQ7L5Y9 396 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 HOOK3Q86VS8 718 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 FBXO11Q86XK2 927 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 COL23A1Q86Y22 540 aaPredicted RBP14.99□□□□□ -0.01
NUP98-204ENST00000397004 MGARPQ8TDB4 240 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 FGFR1OP2Q9NVK5 253 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 CTTNBP2NLQ9P2B4 639 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 EMSYQ7Z589 1322 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 ARP10275 920 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 GCLMP48507 274 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 TBC1D10BQ4KMP7 808 aaPredicted RBP14.99□□□□□ -0.01
NUP98-204ENST00000397004 SYDE2Q5VT97 1194 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 C11orf63Q6NUN7 778 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 DHX37Q8IY37 1157 aaKnown RBP14.99□□□□□ -0.01
NUP98-204ENST00000397004 MKNK1Q9BUB5 465 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 TMEM109Q9BVC6 243 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 NYAP2Q9P242 653 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 BAIAP2L1Q9UHR4 511 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 DIS3Q9Y2L1 958 aaKnown RBP14.99□□□□□ -0.01
NUP98-204ENST00000397004 COILP38432 576 aaPredicted RBP14.99□□□□□ -0.01
NUP98-204ENST00000397004 SETQ01105 290 aaPredicted RBP14.99□□□□□ -0.01
NUP98-204ENST00000397004 ITIH4Q14624 930 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 DCAF4Q8WV16 495 aa14.99□□□□□ -0.01
NUP98-204ENST00000397004 CDC42EP4Q9H3Q1 356 aaKnown RBP14.99□□□□□ -0.01
NUP98-204ENST00000397004 CCDC169A6NNP5 214 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 BBOX1O75936 387 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 AGTP01019 485 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 CLTAP09496 248 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 TNIP1Q15025 636 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 CERKLQ49MI3 558 aaPredicted RBP14.98□□□□□ -0.01
NUP98-204ENST00000397004 ODR4Q5SWX8 454 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 LLGL2Q6P1M3 1020 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 RHBDF2Q6PJF5 856 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 KIF2BQ8N4N8 673 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 EPS8L1Q8TE68 723 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 PSPC1Q8WXF1 523 aaKnown RBP14.98□□□□□ -0.01
NUP98-204ENST00000397004 SEMA4DQ92854 862 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 FAM212AQ96EL1 285 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 RGPD3A6NKT7 1758 aaPredicted RBP14.98□□□□□ -0.01
NUP98-204ENST00000397004 RGPD4Q7Z3J3 1758 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 PCNTO95613 3336 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 VIMP08670 466 aaKnown RBP14.98□□□□□ -0.01
NUP98-204ENST00000397004 CHRNA3P32297 505 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 EPC2Q52LR7 807 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 TATDN1Q6P1N9 297 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 NSMFQ6X4W1 530 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 KRT27Q7Z3Y8 459 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 PRUNE1Q86TP1 453 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 AGAP11Q8TF27 550 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 C1orf54Q8WWF1 131 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 ATG4AQ8WYN0 398 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 MIEF2Q96C03 454 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 RBM17Q96I25 401 aaKnown RBP14.98□□□□□ -0.01
NUP98-204ENST00000397004 UNC45AQ9H3U1 944 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 TMEM150BA6NC51 233 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 O00370 1275 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 ACSL3O95573 720 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 RARGP13631 454 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 CDC25CP30307 473 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 B3GNT9Q6UX72 402 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 SLC13A5Q86YT5 568 aaPredicted RBP14.98□□□□□ -0.01
NUP98-204ENST00000397004 FAM178BQ8IXR5 827 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 RMDN2Q96LZ7 410 aa14.98□□□□□ -0.01
NUP98-204ENST00000397004 CHST7Q9NS84 486 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms