RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 SRGAP2CP0DJJ0 459 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 EFNA5P52803 228 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 KCNA1Q09470 495 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 ZCWPW2Q504Y3 356 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 TAS1R3Q7RTX0 852 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 MAP4K3Q8IVH8 894 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 ZBTB8OSQ8IWT0 167 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 CCDC113Q9H0I3 377 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 SEMA6BQ9H3T3 888 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 TMEM206Q9H813 350 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 IFT122Q9HBG6 1241 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 ZNF446Q9NWS9 450 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 TBX20Q9UMR3 447 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 BICDL2A1A5D9 508 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 GPR32O75388 356 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 STX17P56962 302 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 LRRC63Q05C16 580 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 PTK7Q13308 1070 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 NELFCDQ8IXH7 590 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 ACCSQ96QU6 501 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 PANX2Q96RD6 677 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 ADAMTS10Q9H324 1103 aa16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 TRMT13Q9NUP7 481 aaKnown RBP16.22■□□□□ 0.19
TM9SF1-202ENST00000396854 KIAA0100Q14667 2235 aaKnown RBP16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 A0A087WZ62 844 aa16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 TADA3O75528 432 aa16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 PHKA2P46019 1235 aa16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 PMS1P54277 932 aaKnown RBP16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 ADKP55263 362 aaKnown RBP16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 NLRP11P59045 1033 aaKnown RBP16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 TTI2Q6NXR4 508 aa16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 PPP4R3CPQ6ZMV5 832 aa16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 FDXACB1Q9BRP7 624 aaPredicted RBP16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 SENP6Q9GZR1 1112 aaPredicted RBP16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 TYW1Q9NV66 732 aaKnown RBP16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 TRAF3IP3Q9Y228 551 aa16.21■□□□□ 0.19
TM9SF1-202ENST00000396854 MROH7Q68CQ1 1323 aa16.21■□□□□ 0.18
TM9SF1-202ENST00000396854 TRIM49BA6NDI0 452 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 EFCAB8A8MWE9 144 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 K7ERI5 159 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 PDXKO00764 312 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 B4GALT4O60513 344 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 URI1O94763 535 aaPredicted RBP16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 SNX17Q15036 470 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 ARHGAP29Q52LW3 1261 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 C1orf53Q5VUE5 145 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 TOGARAM2Q6ZUX3 1019 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 RSPH3Q86UC2 560 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 FAM126BQ8IXS8 530 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 WNT8BQ93098 351 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 EXOC7Q9UPT5 735 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 AKR1B15C9JRZ8 316 aaPredicted RBP16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 TGFB1I1O43294 461 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 PBX1P40424 430 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 MBTD1Q05BQ5 628 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 ANKRD40Q6AI12 368 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 SRGAP1Q7Z6B7 1085 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 MNS1Q8NEH6 495 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 NLRP7Q8WX94 980 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 UBXN4Q92575 508 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 GBP3Q9H0R5 595 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 NOD1Q9Y239 953 aa16.2■□□□□ 0.18
TM9SF1-202ENST00000396854 CAND2O75155 1236 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 PIGRP01833 764 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 TPM1P09493 284 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 CASQ1P31415 396 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 CLCN6P51797 869 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 SNRPFP62306 86 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 MRPS6P82932 125 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 SPAG1Q07617 926 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 TMEM62Q0P6H9 643 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 STRN3Q13033 797 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 NFIL3Q16649 462 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 MAPK6Q16659 721 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 FAM187BQ17R55 369 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 KIZQ2M2Z5 673 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 TRIM71Q2Q1W2 868 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 EDRF1Q3B7T1 1238 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 SLC39A5Q6ZMH5 540 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 DIS3LQ8TF46 1054 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 DHX38Q92620 1227 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 ZNF668Q96K58 619 aaPredicted RBP16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 PPP1R16BQ96T49 567 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 TSG101Q99816 390 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 NAA15Q9BXJ9 866 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 FZD8Q9H461 694 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 TANC1Q9C0D5 1861 aa16.19■□□□□ 0.18
TM9SF1-202ENST00000396854 CD4P01730 458 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 BMS1Q14692 1282 aaKnown RBP16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 ZC3H3Q8IXZ2 948 aaKnown RBP16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 SYCP3Q8IZU3 236 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 GOLGA5Q8TBA6 731 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 NOC3LQ8WTT2 800 aaKnown RBP16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 TMEM174Q8WUU8 243 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 DUSP9Q99956 384 aaKnown RBP16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 GCOM2Q9BZD3 368 aaPredicted RBP16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 TRPV6Q9H1D0 765 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 MINDY3Q9H8M7 445 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 TEX33O43247 280 aa16.18■□□□□ 0.18
TM9SF1-202ENST00000396854 CALUO43852 315 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms