RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 MAFO75444 373 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-202ENST00000396629 SPATA31D3P0C874 917 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 MYBP10242 640 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 LMNB2Q03252 620 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 PRKCQQ04759 706 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 ST3GAL2Q16842 350 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 PFKFB3Q16875 520 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-202ENST00000396629 XKR3Q5GH77 459 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 UBXN11Q5T124 520 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 CREB3L3Q68CJ9 461 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 RSPO2Q6UXX9 243 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-202ENST00000396629 SPATA31D4Q6ZUB0 917 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 GET4Q7L5D6 327 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-202ENST00000396629 RHPN2Q8IUC4 686 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 RDM1Q8NG50 284 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 SLC5A5Q92911 643 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 SECISBP2LQ93073 1101 aaKnown RBP9.48□□□□□ -0.89
SCFD1-202ENST00000396629 RPP25Q9BUL9 199 aaKnown RBP9.48□□□□□ -0.89
SCFD1-202ENST00000396629 EPC1Q9H2F5 836 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 UNC45AQ9H3U1 944 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 IFT122Q9HBG6 1241 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 CHST7Q9NS84 486 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 ZSCAN32Q9NX65 697 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 FNIP2Q9P278 1114 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 SEPT9Q9UHD8 586 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-202ENST00000396629 CDV3Q9UKY7 258 aaKnown RBP9.48□□□□□ -0.89
SCFD1-202ENST00000396629 BRPF3Q9ULD4 1205 aa9.48□□□□□ -0.89
SCFD1-202ENST00000396629 GPR179Q6PRD1 2367 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 ZBTB43O43298 467 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 POMCP01189 267 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 ADRB1P08588 477 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 NCLP19338 710 aaKnown RBP9.47□□□□□ -0.89
SCFD1-202ENST00000396629 EXOSC10Q01780 885 aaKnown RBP9.47□□□□□ -0.89
SCFD1-202ENST00000396629 CSTF1Q05048 431 aaKnown RBP9.47□□□□□ -0.89
SCFD1-202ENST00000396629 DSC1Q08554 894 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 MLF2Q15773 248 aaPredicted RBP9.47□□□□□ -0.89
SCFD1-202ENST00000396629 PARM1Q6UWI2 310 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 KSR1Q8IVT5 923 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 ATRIPQ8WXE1 791 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 FGF14Q92915 247 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 PHKBQ93100 1093 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 MBOAT7Q96N66 472 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 TEKT3Q9BXF9 490 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 C6orf50Q9HD87 102 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 UBN1Q9NPG3 1134 aa9.47□□□□□ -0.89
SCFD1-202ENST00000396629 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCFD1-202ENST00000396629 SMG5Q9UPR3 1016 aaKnown RBP9.47□□□□□ -0.89
SCFD1-202ENST00000396629 PRG3Q9Y2Y8 225 aaPredicted RBP9.47□□□□□ -0.89
SCFD1-202ENST00000396629 MTF2Q9Y483 593 aaPredicted RBP9.47□□□□□ -0.89
SCFD1-202ENST00000396629 DCDC2BA2VCK2 349 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 TMEM150BA6NC51 233 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 TGM5O43548 720 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 TBC1D4O60343 1298 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 GAS7O60861 476 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 ZMYND10O75800 440 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 FSHRP23945 695 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 CDC27P30260 824 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 HOXA11P31270 313 aaPredicted RBP9.46□□□□□ -0.89
SCFD1-202ENST00000396629 OR1G1P47890 313 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 SNW1Q13573 536 aaKnown RBP9.46□□□□□ -0.89
SCFD1-202ENST00000396629 SLC44A4Q53GD3 710 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 B3GNT9Q6UX72 402 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 PALB2Q86YC2 1186 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 REXO1Q8N1G1 1221 aaKnown RBP9.46□□□□□ -0.89
SCFD1-202ENST00000396629 CNNM3Q8NE01 707 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 NOTCH4Q99466 2003 aa9.46□□□□□ -0.89
SCFD1-202ENST00000396629 FAM170BA6NMN3 283 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 GOLGA8AA7E2F4 631 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 GOLGA8BA8MQT2 603 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 CHMP2AO43633 222 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 PSMD10O75832 226 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 RCAN1P53805 252 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 LRCH2Q5VUJ6 765 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 MIER3Q7Z3K6 550 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 SRGAP1Q7Z6B7 1085 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 SMG8Q8ND04 991 aaKnown RBP9.46□□□□□ -0.9
SCFD1-202ENST00000396629 ST13P5Q8NFI4 369 aaPredicted RBP9.46□□□□□ -0.9
SCFD1-202ENST00000396629 CCDC12Q8WUD4 166 aaPredicted RBP9.46□□□□□ -0.9
SCFD1-202ENST00000396629 CLDN23Q96B33 292 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 NLRP4Q96MN2 994 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 JPH2Q9BR39 696 aaPredicted RBP9.46□□□□□ -0.9
SCFD1-202ENST00000396629 SH2D3AQ9BRG2 576 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 LTB4R2Q9NPC1 389 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 CDH7Q9ULB5 785 aa9.46□□□□□ -0.9
SCFD1-202ENST00000396629 MAP1BP46821 2468 aaKnown RBP9.45□□□□□ -0.9
SCFD1-202ENST00000396629 DDX11L8A8MPP1 907 aa9.45□□□□□ -0.9
SCFD1-202ENST00000396629 ITGA4P13612 1032 aa9.45□□□□□ -0.9
SCFD1-202ENST00000396629 GNA11P29992 359 aa9.45□□□□□ -0.9
SCFD1-202ENST00000396629 USP11P51784 963 aa9.45□□□□□ -0.9
SCFD1-202ENST00000396629 UBXN2BQ14CS0 331 aa9.45□□□□□ -0.9
SCFD1-202ENST00000396629 MTSS1LQ765P7 747 aa9.45□□□□□ -0.9
SCFD1-202ENST00000396629 CCDC136Q96JN2 1154 aa9.45□□□□□ -0.9
SCFD1-202ENST00000396629 COLEC11Q9BWP8 271 aa9.45□□□□□ -0.9
SCFD1-202ENST00000396629 MINDY3Q9H8M7 445 aa9.45□□□□□ -0.9
SCFD1-202ENST00000396629 PARD6AQ9NPB6 346 aa9.45□□□□□ -0.9
SCFD1-202ENST00000396629 MIOSQ9NXC5 875 aa9.45□□□□□ -0.9
SCFD1-202ENST00000396629 COL4A3BPQ9Y5P4 624 aa9.45□□□□□ -0.9
SCFD1-202ENST00000396629 F8W810 466 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 RPS9P46781 194 aaKnown RBP9.44□□□□□ -0.9
SCFD1-202ENST00000396629 PFKPQ01813 784 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms