RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ERO1AQ96HE7 468 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 ZBTB45Q96K62 511 aaPredicted RBP13.87□□□□□ -0.19
TRIM39-204ENST00000396548 TARS2Q9BW92 718 aaKnown RBP13.87□□□□□ -0.19
TRIM39-204ENST00000396548 SMIM35A0A1B0GVV1 85 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 PES1O00541 588 aaKnown RBP13.87□□□□□ -0.19
TRIM39-204ENST00000396548 KIAA0391O15091 583 aaKnown RBP13.87□□□□□ -0.19
TRIM39-204ENST00000396548 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 CCDC112Q8NEF3 446 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 LMO3Q8TAP4 145 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 PLCB1Q9NQ66 1216 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 SPTLC3Q9NUV7 552 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 ACKR2O00590 384 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 EXTL3O43909 919 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 STX10O60499 249 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 GPR32O75388 356 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 PON1P27169 355 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 HNRNPH3P31942 346 aaKnown RBP13.87□□□□□ -0.19
TRIM39-204ENST00000396548 FMO5P49326 533 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 LIG4P49917 911 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 GPC3P51654 580 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 VAMP7P51809 220 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 MEA1Q16626 185 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 WDR59Q6PJI9 974 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 GPD1LQ8N335 351 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 CPLX3Q8WVH0 158 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 KATNAL1Q9BW62 490 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 EDEM3Q9BZQ6 932 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 GOLGA8IPA6NC78 632 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 GOLGA8JA6NMD2 632 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 PGK1P00558 417 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 VTNP04004 478 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 PRKCBP05771 671 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 CYP24A1Q07973 514 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 PPP3CAQ08209 521 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 DCAF17Q5H9S7 520 aaPredicted RBP13.86□□□□□ -0.19
TRIM39-204ENST00000396548 RDH13Q8NBN7 331 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 TMC2Q8TDI7 906 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 PPP1R13LQ8WUF5 828 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 A0A087WZ62 844 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 TRIM49P0CI25 452 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 TRIM49CP0CI26 452 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 RARBP10826 455 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 WNT7BP56706 349 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 APBA1Q02410 837 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 MCL1Q07820 350 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 SLFN12LQ6IEE8 588 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 ZBTB8OSQ8IWT0 167 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 PARD3BQ8TEW8 1205 aa13.86□□□□□ -0.19
TRIM39-204ENST00000396548 BAG1Q99933 345 aaPredicted RBP13.86□□□□□ -0.19
TRIM39-204ENST00000396548 FDXACB1Q9BRP7 624 aaPredicted RBP13.86□□□□□ -0.19
TRIM39-204ENST00000396548 MRPL4Q9BYD3 311 aaKnown RBP13.86□□□□□ -0.19
TRIM39-204ENST00000396548 C6orf222P0C671 652 aaPredicted RBP13.85□□□□□ -0.19
TRIM39-204ENST00000396548 SLC9A1P19634 815 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 TMOD1P28289 359 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 ZBED6P86452 979 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 NLRP4Q96MN2 994 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 MTG1Q9BT17 334 aaPredicted RBP13.85□□□□□ -0.19
TRIM39-204ENST00000396548 NAA15Q9BXJ9 866 aaKnown RBP13.85□□□□□ -0.19
TRIM39-204ENST00000396548 FBXL5Q9UKA1 691 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 LRRIQ3A6PVS8 624 aaPredicted RBP13.85□□□□□ -0.19
TRIM39-204ENST00000396548 TOM1L1O75674 476 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 PRMT2P55345 433 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 NLRP11P59045 1033 aaKnown RBP13.85□□□□□ -0.19
TRIM39-204ENST00000396548 MAPK6Q16659 721 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 ZNF410Q86VK4 478 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 C17orf53Q8N3J3 647 aaPredicted RBP13.85□□□□□ -0.19
TRIM39-204ENST00000396548 BICD1Q96G01 975 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 KIAA1586Q9HCI6 787 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 HDAC6Q9UBN7 1215 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 AGO2Q9UKV8 859 aaKnown RBP13.85□□□□□ -0.19
TRIM39-204ENST00000396548 TREHO43280 583 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 B4GALT5O43286 388 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 KRT9P35527 623 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 ZNF200P98182 395 aaPredicted RBP13.85□□□□□ -0.19
TRIM39-204ENST00000396548 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 ZBTB41Q5SVQ8 909 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 E4F1Q66K89 784 aaPredicted RBP13.85□□□□□ -0.19
TRIM39-204ENST00000396548 C15orf39Q6ZRI6 1047 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 SESTD1Q86VW0 696 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 XPNPEP3Q9NQH7 507 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 FAM207AQ9NSI2 230 aaPredicted RBP13.85□□□□□ -0.19
TRIM39-204ENST00000396548 CEP72Q9P209 647 aa13.85□□□□□ -0.19
TRIM39-204ENST00000396548 LUC7L2Q9Y383 392 aaKnown RBP13.85□□□□□ -0.19
TRIM39-204ENST00000396548 P4HA2O15460 535 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 TRIM21P19474 475 aaKnown RBP13.84□□□□□ -0.19
TRIM39-204ENST00000396548 PHKA2P46019 1235 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 EPC2Q52LR7 807 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 KLHDC7AQ5VTJ3 777 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 OR8K1Q8NGG5 319 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 ZNF668Q96K58 619 aaPredicted RBP13.84□□□□□ -0.19
TRIM39-204ENST00000396548 FAM213AQ9BRX8 229 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 CRACR2AQ9BSW2 395 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 LSM14BQ9BX40 385 aaKnown RBP13.84□□□□□ -0.19
TRIM39-204ENST00000396548 MMRN2Q9H8L6 949 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 DDX20Q9UHI6 824 aaKnown RBP13.84□□□□□ -0.19
TRIM39-204ENST00000396548 AKT3Q9Y243 479 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 GRIN2DO15399 1336 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 CNTNAP2Q9UHC6 1331 aa13.84□□□□□ -0.19
TRIM39-204ENST00000396548 ACTN1P12814 892 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms