RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 JPH2Q9BR39 696 aaPredicted RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 PORCNQ9H237 461 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 POLR2AP24928 1970 aaKnown RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 COL11A1P12107 1806 aaPredicted RBP17.45■□□□□ 0.38
SNX6-202ENST00000396526 PDE2AO00408 941 aaPredicted RBP17.45■□□□□ 0.38
SNX6-202ENST00000396526 CES2O00748 559 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 DLATP10515 647 aaKnown RBP17.45■□□□□ 0.38
SNX6-202ENST00000396526 ADSSP30520 456 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 SOX10P56693 466 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 C2orf54Q08AI8 447 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 DLK2Q6UY11 383 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 ENOSF1Q7L5Y1 443 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 LMO3Q8TAP4 145 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 RFFLQ8WZ73 363 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 CLMNQ96JQ2 1002 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 MFSD14AQ96MC6 490 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 MMP19Q99542 508 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 RLFQ13129 1914 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 ANKRD62A6NC57 917 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 IQCA1LA6NCM1 817 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 CYP24A1Q07973 514 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 WDR44Q5JSH3 913 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 C8orf74Q6P047 294 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 DAAM2Q86T65 1068 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 UBE2Q2Q8WVN8 375 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 FUT8Q9BYC5 575 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 DHX33Q9H6R0 707 aaKnown RBP17.45■□□□□ 0.38
SNX6-202ENST00000396526 FAM53CQ9NYF3 392 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 AMFRQ9UKV5 643 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 SOWAHBA6NEL2 793 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 EXTL3O43909 919 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 ADRB2P07550 413 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 TNNC1P63316 161 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 EAPPQ56P03 285 aaPredicted RBP17.45■□□□□ 0.38
SNX6-202ENST00000396526 RHOT2Q8IXI1 618 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 TMEM143Q96AN5 459 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 OPTNQ96CV9 577 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 SLC10A4Q96EP9 437 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 L3MBTL3Q96JM7 780 aaPredicted RBP17.45■□□□□ 0.38
SNX6-202ENST00000396526 FAM213AQ9BRX8 229 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 RAB20Q9NX57 234 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 USP20Q9Y2K6 914 aa17.45■□□□□ 0.38
SNX6-202ENST00000396526 PARP14Q460N5 1801 aa17.44■□□□□ 0.38
SNX6-202ENST00000396526 KCNK3O14649 394 aa17.44■□□□□ 0.38
SNX6-202ENST00000396526 FARP2O94887 1054 aaPredicted RBP17.44■□□□□ 0.38
SNX6-202ENST00000396526 CCNA1P78396 465 aa17.44■□□□□ 0.38
SNX6-202ENST00000396526 SNAPC2Q13487 334 aa17.44■□□□□ 0.38
SNX6-202ENST00000396526 EEPD1Q7L9B9 569 aa17.44■□□□□ 0.38
SNX6-202ENST00000396526 TPCN2Q8NHX9 752 aa17.44■□□□□ 0.38
SNX6-202ENST00000396526 TCP11Q8WWU5 503 aa17.44■□□□□ 0.38
SNX6-202ENST00000396526 TNNT3P45378 269 aaPredicted RBP17.44■□□□□ 0.38
SNX6-202ENST00000396526 SLC30A5Q8TAD4 765 aa17.44■□□□□ 0.38
SNX6-202ENST00000396526 L1RE1Q9UN81 338 aa17.44■□□□□ 0.38
SNX6-202ENST00000396526 COQ4Q9Y3A0 265 aa17.44■□□□□ 0.38
SNX6-202ENST00000396526 LOC102724159A0A0B4J2E5 919 aa17.43■□□□□ 0.38
SNX6-202ENST00000396526 GAS2O43903 313 aaKnown RBP17.43■□□□□ 0.38
SNX6-202ENST00000396526 ZC3H11AO75152 810 aaKnown RBP eCLIP17.43■□□□□ 0.38
SNX6-202ENST00000396526 KIF4AO95239 1232 aa17.43■□□□□ 0.38
SNX6-202ENST00000396526 TNNI1P19237 187 aa17.43■□□□□ 0.38
SNX6-202ENST00000396526 ABCB4P21439 1286 aa17.43■□□□□ 0.38
SNX6-202ENST00000396526 GPC3P51654 580 aa17.43■□□□□ 0.38
SNX6-202ENST00000396526 SMC1AQ14683 1233 aaKnown RBP17.43■□□□□ 0.38
SNX6-202ENST00000396526 PWP2Q15269 919 aaKnown RBP17.43■□□□□ 0.38
SNX6-202ENST00000396526 AGO2Q9UKV8 859 aaKnown RBP17.43■□□□□ 0.38
SNX6-202ENST00000396526 IGKV6D-21A0A0A0MT36 114 aa17.43■□□□□ 0.38
SNX6-202ENST00000396526 C1orf112Q9NSG2 853 aa17.43■□□□□ 0.38
SNX6-202ENST00000396526 TCF7P36402 384 aaPredicted RBP17.43■□□□□ 0.38
SNX6-202ENST00000396526 EFNA5P52803 228 aa17.43■□□□□ 0.38
SNX6-202ENST00000396526 DHX37Q8IY37 1157 aaKnown RBP17.43■□□□□ 0.38
SNX6-202ENST00000396526 MSL3Q8N5Y2 521 aaKnown RBP17.43■□□□□ 0.38
SNX6-202ENST00000396526 LNX1Q8TBB1 728 aaPredicted RBP17.43■□□□□ 0.38
SNX6-202ENST00000396526 GSTTP1A0A1W2PQM5 241 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 ASB14A6NK59 587 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 LRRIQ3A6PVS8 624 aaPredicted RBP17.42■□□□□ 0.38
SNX6-202ENST00000396526 CLSTN1O94985 981 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 ARHGEF19Q8IW93 802 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 AFAP1L1Q8TED9 768 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 BBXQ8WY36 941 aaPredicted RBP17.42■□□□□ 0.38
SNX6-202ENST00000396526 PDE6CP51160 858 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 C1orf220Q5T0J3 134 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 PNMA8AQ86V59 439 aaPredicted RBP17.42■□□□□ 0.38
SNX6-202ENST00000396526 ZBTB8OSQ8IWT0 167 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 TMEM134Q9H6X4 195 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 SUCLA2Q9P2R7 463 aaPredicted RBP17.42■□□□□ 0.38
SNX6-202ENST00000396526 NENFQ9UMX5 172 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 CLEC11AQ9Y240 323 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 CEP104O60308 925 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 ARL2P36404 184 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 MCCD1P59942 119 aaPredicted RBP17.42■□□□□ 0.38
SNX6-202ENST00000396526 CLUL1Q15846 466 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 IER5Q5VY09 327 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 SV2AQ7L0J3 742 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.42■□□□□ 0.38
SNX6-202ENST00000396526 KCNN1Q92952 543 aa17.42■□□□□ 0.38
SNX6-202ENST00000396526 DIS3Q9Y2L1 958 aaKnown RBP17.42■□□□□ 0.38
SNX6-202ENST00000396526 GZMAP12544 262 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 GLRA2P23416 452 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 PLA2G4AP47712 749 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 BPIFB4P59827 614 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 FAM193AP78312 1265 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms