RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 STXBP2Q15833 593 aa12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 CYFIP1Q7L576 1253 aa12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 NCAPG2Q86XI2 1143 aa12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 CCDC105Q8IYK2 499 aa12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 GPD1LQ8N335 351 aa12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 INPP4AQ96PE3 977 aaPredicted RBP12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 ZIM3Q96PE6 472 aa12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 PAGR1Q9BTK6 254 aa12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 FAM107BQ9H098 131 aa12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 CHORDC1Q9UHD1 332 aaPredicted RBP12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 PLAAQ9Y263 795 aa12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 ASTN2O75129 1339 aaPredicted RBP12.46□□□□□ -0.42
PDXDC1-202ENST00000396410 C19orf81C9J6K1 198 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 CES2O00748 559 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 RTN2O75298 545 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 GJC1P36383 396 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 PIK3CAP42336 1068 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 MAPK7Q13164 816 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 PPP1R7Q15435 360 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 POTEAQ6S8J7 498 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 DDX42Q86XP3 938 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 CCDC50Q8IVM0 306 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 RDM1Q8NG50 284 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 MPHOSPH6Q99547 160 aaKnown RBP12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 POP1Q99575 1024 aaKnown RBP12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 TMEM117Q9H0C3 514 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 SLITRK6Q9H5Y7 841 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 PHF20L1A8MW92 1017 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 GTF2BQ00403 316 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 PRKCEQ02156 737 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 NT5DC3Q86UY8 548 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 ARFGAP2Q8N6H7 521 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 GDF3Q9NR23 364 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 MTRF1LQ9UGC7 380 aaKnown RBP12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 DHX15O43143 795 aaKnown RBP12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 TTI1O43156 1089 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 SGPL1O95470 568 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 RUFY4Q6ZNE9 571 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 GADL1Q6ZQY3 521 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 CAVIN3Q969G5 261 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 MAGOHBQ96A72 148 aaKnown RBP12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 TAS2R14Q9NYV8 317 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 CSADQ9Y600 493 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 RPTORQ8N122 1335 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 MIF4GDA9UHW6 222 aaKnown RBP12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 EBAG9O00559 213 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 DAPK3O43293 454 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 KRT14P02533 472 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 BORCS6Q96GS4 357 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 ISCUQ9H1K1 167 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 AZI2Q9H6S1 392 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 ZNF302Q9NR11 478 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 ALG6Q9Y672 507 aa12.45□□□□□ -0.42
PDXDC1-202ENST00000396410 KIAA0754O94854 1291 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 FAM153BP0C7A2 387 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 CETN2P41208 172 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 IRX3P78415 501 aaPredicted RBP12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 LLGL1Q15334 1064 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 FAM153CQ494X1 144 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 LMBRD2Q68DH5 695 aaPredicted RBP12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 TSEN2Q8NCE0 465 aaKnown RBP12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 ARHGEF26Q96DR7 871 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 NUP85Q9BW27 656 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 TMEM8AQ9HCN3 771 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 RAB20Q9NX57 234 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 FAM153AQ9UHL3 310 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 RIPK3Q9Y572 518 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 PFASO15067 1338 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 A6NNZ2 444 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 ANKRD63C9JTQ0 380 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 K7ERI5 159 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 ATMINO43313 823 aaPredicted RBP12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 LYPLA2O95372 231 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 CCNE2O96020 404 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 DHX9Q08211 1270 aaKnown RBP12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 TUBB8Q3ZCM7 444 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 EEPD1Q7L9B9 569 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 PHLDB2Q86SQ0 1253 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 ZNF564Q8TBZ8 553 aaPredicted RBP12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 BCAS4Q8TDM0 211 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 HVCN1Q96D96 273 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 FIZ1Q96SL8 496 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 CELF4Q9BZC1 486 aaKnown RBP12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 GGA3Q9NZ52 723 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 SYNGAP1Q96PV0 1343 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 TLDC2A0PJX2 215 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 SMIM23A6NLE4 172 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 KCNA3P22001 575 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 ACTR2P61160 394 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 VSIG10LQ86VR7 867 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 CCDC25Q86WR0 208 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 GLG1Q92896 1179 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 CCDC113Q9H0I3 377 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 NRBP2Q9NSY0 501 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 ARFGEF1Q9Y6D6 1849 aa12.44□□□□□ -0.42
PDXDC1-202ENST00000396410 NDUFAB1O14561 156 aa12.43□□□□□ -0.42
PDXDC1-202ENST00000396410 ITGA4P13612 1032 aa12.43□□□□□ -0.42
PDXDC1-202ENST00000396410 PTPRAP18433 802 aa12.43□□□□□ -0.42
PDXDC1-202ENST00000396410 DSG3P32926 999 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms