RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 FXR2P51116 673 aaKnown RBP eCLIP20.29■□□□□ 0.84
FXN-203ENST00000396366 NCBP1Q09161 790 aaKnown RBP20.29■□□□□ 0.84
FXN-203ENST00000396366 PCBP1Q15365 356 aaKnown RBP eCLIP20.29■□□□□ 0.84
FXN-203ENST00000396366 IL17AQ16552 155 aa20.29■□□□□ 0.84
FXN-203ENST00000396366 CNNM3Q8NE01 707 aa20.29■□□□□ 0.84
FXN-203ENST00000396366 RSPH1Q8WYR4 309 aa20.29■□□□□ 0.84
FXN-203ENST00000396366 SUSD6Q92537 303 aa20.29■□□□□ 0.84
FXN-203ENST00000396366 FAM193BQ96PV7 902 aaPredicted RBP20.29■□□□□ 0.84
FXN-203ENST00000396366 NXF3Q9H4D5 531 aaKnown RBP20.29■□□□□ 0.84
FXN-203ENST00000396366 MUTYHQ9UIF7 546 aa20.29■□□□□ 0.84
FXN-203ENST00000396366 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.28■□□□□ 0.84
FXN-203ENST00000396366 PP2D1A8MPX8 630 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 NRP1O14786 923 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 ST18O60284 1047 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 NPTXRO95502 500 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 ALDH2P05091 517 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 SSBP05455 408 aaKnown RBP eCLIP20.28■□□□□ 0.84
FXN-203ENST00000396366 CYP11B2P19099 503 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 MLH1P40692 756 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 KANK3Q6NY19 840 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 MCPH1Q8NEM0 835 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 CCDC51Q96ER9 411 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 RPGRIP1Q96KN7 1286 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 POP1Q99575 1024 aaKnown RBP20.28■□□□□ 0.84
FXN-203ENST00000396366 KANSL3Q9P2N6 904 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 KIAA1024Q9UPX6 916 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 FAN1Q9Y2M0 1017 aa20.28■□□□□ 0.84
FXN-203ENST00000396366 A0A1B0GUA9 196 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 FSD2A1L4K1 749 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 ARHGEF35A5YM69 484 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 LOC730098B7Z3J9 87 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 F8W810 466 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 CTSAP10619 480 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 CDC25AP30304 524 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 SCNN1GP51170 649 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 MCTP1Q6DN14 999 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 TAS1R1Q7RTX1 841 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 COLGALT2Q8IYK4 626 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 C12orf76Q8N812 135 aaPredicted RBP20.27■□□□□ 0.84
FXN-203ENST00000396366 FEZF2Q8TBJ5 459 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 UBN1Q9NPG3 1134 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 KLK14Q9P0G3 267 aa20.27■□□□□ 0.84
FXN-203ENST00000396366 EDN1P05305 212 aa20.26■□□□□ 0.83
FXN-203ENST00000396366 SRGAP2BP0DMP2 458 aa20.26■□□□□ 0.83
FXN-203ENST00000396366 EPCAMP16422 314 aa20.26■□□□□ 0.83
FXN-203ENST00000396366 GJB2P29033 226 aa20.26■□□□□ 0.83
FXN-203ENST00000396366 PDIA5Q14554 519 aa20.26■□□□□ 0.83
FXN-203ENST00000396366 CDCA2Q69YH5 1023 aaPredicted RBP20.26■□□□□ 0.83
FXN-203ENST00000396366 SLC27A1Q6PCB7 646 aa20.26■□□□□ 0.83
FXN-203ENST00000396366 IGSF22Q8N9C0 903 aa20.26■□□□□ 0.83
FXN-203ENST00000396366 GSTCDQ8NEC7 633 aa20.26■□□□□ 0.83
FXN-203ENST00000396366 TMEM175Q9BSA9 504 aa20.26■□□□□ 0.83
FXN-203ENST00000396366 PHF7Q9BWX1 381 aaPredicted RBP20.26■□□□□ 0.83
FXN-203ENST00000396366 TRIM6Q9C030 488 aaPredicted RBP20.26■□□□□ 0.83
FXN-203ENST00000396366 BHMT2Q9H2M3 363 aa20.26■□□□□ 0.83
FXN-203ENST00000396366 FZD8Q9H461 694 aa20.26■□□□□ 0.83
FXN-203ENST00000396366 DDX19AQ9NUU7 478 aaKnown RBP20.26■□□□□ 0.83
FXN-203ENST00000396366 MARCH5Q9NX47 278 aa20.26■□□□□ 0.83
FXN-203ENST00000396366 PRG3Q9Y2Y8 225 aaPredicted RBP20.26■□□□□ 0.83
FXN-203ENST00000396366 TDRD15B5MCY1 1934 aaKnown RBP20.25■□□□□ 0.83
FXN-203ENST00000396366 E9PMD0 336 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 INPPL1O15357 1258 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 WEE2P0C1S8 567 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 LIG1P18858 919 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 OR1G1P47890 313 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 CBX2Q14781 532 aaPredicted RBP20.25■□□□□ 0.83
FXN-203ENST00000396366 PTPN14Q15678 1187 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 HAUS3Q68CZ6 603 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 SNX29Q8TEQ0 813 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 SLC22A17Q8WUG5 538 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 RABGGTAQ92696 567 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 CASP10Q92851 521 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 KIFC3Q9BVG8 833 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.25■□□□□ 0.83
FXN-203ENST00000396366 IRAK3Q9Y616 596 aa20.25■□□□□ 0.83
FXN-203ENST00000396366 HOXB8P17481 243 aaPredicted RBP20.24■□□□□ 0.83
FXN-203ENST00000396366 MUTP22033 750 aa20.24■□□□□ 0.83
FXN-203ENST00000396366 SP100P23497 879 aaPredicted RBP20.24■□□□□ 0.83
FXN-203ENST00000396366 DSC1Q08554 894 aa20.24■□□□□ 0.83
FXN-203ENST00000396366 BMS1Q14692 1282 aaKnown RBP20.24■□□□□ 0.83
FXN-203ENST00000396366 PPP4R3CPQ6ZMV5 832 aa20.24■□□□□ 0.83
FXN-203ENST00000396366 ZBTB8OSQ8IWT0 167 aa20.24■□□□□ 0.83
FXN-203ENST00000396366 CCDC113Q9H0I3 377 aa20.24■□□□□ 0.83
FXN-203ENST00000396366 CXCL16Q9H2A7 254 aa20.24■□□□□ 0.83
FXN-203ENST00000396366 PRMT7Q9NVM4 692 aaPredicted RBP20.24■□□□□ 0.83
FXN-203ENST00000396366 CACNG4Q9UBN1 327 aa20.24■□□□□ 0.83
FXN-203ENST00000396366 PARP2Q9UGN5 583 aa20.24■□□□□ 0.83
FXN-203ENST00000396366 GIT1Q9Y2X7 761 aa20.24■□□□□ 0.83
FXN-203ENST00000396366 CARNS1A5YM72 827 aa20.23■□□□□ 0.83
FXN-203ENST00000396366 PRR33A8MZF0 331 aa20.23■□□□□ 0.83
FXN-203ENST00000396366 C2CD2LO14523 706 aa20.23■□□□□ 0.83
FXN-203ENST00000396366 LILRB3O75022 631 aa20.23■□□□□ 0.83
FXN-203ENST00000396366 FAM187BQ17R55 369 aa20.23■□□□□ 0.83
FXN-203ENST00000396366 HERC4Q5GLZ8 1057 aaPredicted RBP20.23■□□□□ 0.83
FXN-203ENST00000396366 TMEM87AQ8NBN3 555 aa20.23■□□□□ 0.83
FXN-203ENST00000396366 TBC1D32Q96NH3 1257 aa20.23■□□□□ 0.83
FXN-203ENST00000396366 KLHL5Q96PQ7 755 aa20.23■□□□□ 0.83
FXN-203ENST00000396366 MMTAG2Q9BU76 263 aaKnown RBP20.23■□□□□ 0.83
FXN-203ENST00000396366 PDZD7Q9H5P4 517 aa20.23■□□□□ 0.83
FXN-203ENST00000396366 UPF2Q9HAU5 1272 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms