RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 MCCD1P59942 119 aaPredicted RBP17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 DR1Q01658 176 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 GHRHRQ02643 423 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 DHX9Q08211 1270 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 FKBP1CQ5VVH2 108 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 CNPY4Q8N129 248 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 XXYLT1Q8NBI6 393 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 FMO2Q99518 471 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 CBWD1Q9BRT8 395 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 ERP44Q9BS26 406 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 TRIM51Q9BSJ1 452 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 DPH5Q9H2P9 285 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 MYOZ2Q9NPC6 264 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 COL20A1Q9P218 1284 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 ZNF536O15090 1300 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 SYNGAP1Q96PV0 1343 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 TISP43B9A030 160 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 HPDP32754 393 aaPredicted RBP17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 GTF2BQ00403 316 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 NLRP14Q86W24 1093 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 ZNF473Q8WTR7 871 aaKnown RBP17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 AGBL1Q96MI9 1066 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 FHDC1Q9C0D6 1143 aaPredicted RBP17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 CENPHQ9H3R5 247 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 ERVK-5Q9HDB9 667 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 HSPBP1Q9NZL4 362 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 CCPG1Q9ULG6 757 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 FZD9O00144 591 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 FTLP02792 175 aaPredicted RBP17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 HSPA6P17066 643 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 INPP5BP32019 993 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 GPC5P78333 572 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 MAEAQ7L5Y9 396 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 MYCBPAPQ8TBZ2 947 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 CCT8L2Q96SF2 557 aa17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 AGO4Q9HCK5 861 aaKnown RBP17.23■□□□□ 0.35
CCHCR1-202ENST00000396263 KIF1CO43896 1103 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 RTN2O75298 545 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 MTA2O94776 668 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 FAM107AO95990 144 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 QARSP47897 775 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 GCLMP48507 274 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 DRG2P55039 364 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 EIF3BP55884 814 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 RPUSD2Q8IZ73 545 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 UBL4BQ8N7F7 174 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 IL31RAQ8NI17 732 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 CLEC4DQ8WXI8 215 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 RPS6KC1Q96S38 1066 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 JPH2Q9BR39 696 aaPredicted RBP17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 TIPINQ9BVW5 301 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 GLIS2Q9BZE0 524 aaPredicted RBP17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 ZDHHC18Q9NUE0 388 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 CTTNBP2NLQ9P2B4 639 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 GGA2Q9UJY4 613 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 SCAF8Q9UPN6 1271 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 UBIAD1Q9Y5Z9 338 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 ZNF541Q9H0D2 1346 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 DICER1Q9UPY3 1922 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 ZNF211Q13398 564 aaPredicted RBP17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 TKFCQ3LXA3 575 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 MICALCLQ6ZW33 695 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 PRPF38AQ8NAV1 312 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 TMEM39BQ9GZU3 492 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 TMOD4Q9NZQ9 345 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 PKD2L1Q9P0L9 805 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 GJA3Q9Y6H8 435 aa17.22■□□□□ 0.35
CCHCR1-202ENST00000396263 SBF1O95248 1867 aa17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 GZMAP12544 262 aa17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 GMPSP49915 693 aaPredicted RBP17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 ZNF280AP59817 542 aaPredicted RBP17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 PPP2R2AP63151 447 aa17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 PCNX4Q63HM2 1172 aa17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 HAUS6Q7Z4H7 955 aa17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 YTHDF3Q7Z739 585 aaKnown RBP17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 MCF2L2Q86YR7 1114 aa17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 C3orf20Q8ND61 904 aa17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 PLEKHO2Q8TD55 490 aa17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 MORC4Q8TE76 937 aa17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 IWS1Q96ST2 819 aa17.21■□□□□ 0.35
CCHCR1-202ENST00000396263 NFIBO00712 420 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 PHF2O75151 1096 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 USP8P40818 1118 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 MXI1P50539 228 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 SEC24CP53992 1094 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 FAM83AQ86UY5 434 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 JAMLQ86YT9 394 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 FAM71AQ8IYT1 594 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 EPS8L1Q8TE68 723 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 ZSWIM1Q9BR11 485 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 TRIM31Q9BZY9 425 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 TMEM117Q9H0C3 514 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 NOCTQ9UK39 431 aaKnown RBP17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 CAPN7Q9Y6W3 813 aa17.21■□□□□ 0.34
CCHCR1-202ENST00000396263 MEFVO15553 781 aaPredicted RBP17.2■□□□□ 0.34
CCHCR1-202ENST00000396263 ASNSP08243 561 aa17.2■□□□□ 0.34
CCHCR1-202ENST00000396263 PAEPP09466 180 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms