RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 HINFPQ9BQA5 517 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 EPB41L5Q9HCM4 733 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 XPNPEP1Q9NQW7 623 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 TAS2R14Q9NYV8 317 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 GGA3Q9NZ52 723 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 NOC2LQ9Y3T9 749 aaKnown RBP18.16■□□□□ 0.5
NUP50-202ENST00000396096 PTPRFP10586 1907 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 GOLGA8IPA6NC78 632 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 GOLGA8JA6NMD2 632 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 TMCO5BA8MYB1 307 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 H0YCG3 227 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 RAD51CO43502 376 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 GARTP22102 1010 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 GPC3P51654 580 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 PRKCEQ02156 737 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 GUCY2DQ02846 1103 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 CCDC60Q8IWA6 550 aaPredicted RBP18.15■□□□□ 0.5
NUP50-202ENST00000396096 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.15■□□□□ 0.5
NUP50-202ENST00000396096 SLC20A1Q8WUM9 679 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 SHC3Q92529 594 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 SH3GL2Q99962 352 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 KIFC3Q9BVG8 833 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 THAP2Q9H0W7 228 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 ATP6V0A4Q9HBG4 840 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 CYP26B1Q9NR63 512 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 KCNG1Q9UIX4 513 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 FZD1Q9UP38 647 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 PAPPA2Q9BXP8 1791 aa18.15■□□□□ 0.5
NUP50-202ENST00000396096 SIP14410 1827 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 CCDC66A2RUB6 948 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 DDX3YO15523 660 aaKnown RBP18.14■□□□□ 0.49
NUP50-202ENST00000396096 SUPT20HL2P0C7V6 817 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 CARSP49589 748 aaKnown RBP18.14■□□□□ 0.49
NUP50-202ENST00000396096 MFAP3P55082 362 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 RNASE9P60153 205 aaKnown RBP18.14■□□□□ 0.49
NUP50-202ENST00000396096 SUPT20HL1Q3ZLR7 823 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 BRDTQ58F21 947 aaPredicted RBP18.14■□□□□ 0.49
NUP50-202ENST00000396096 MIS18BP1Q6P0N0 1132 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 USP37Q86T82 979 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 CHST13Q8NET6 341 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 DNERQ8NFT8 737 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 CASKIN2Q8WXE0 1202 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 SAAL1Q96ER3 474 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 KREMEN1Q96MU8 473 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 ARHGAP28Q9P2N2 729 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 NOCTQ9UK39 431 aaKnown RBP18.14■□□□□ 0.49
NUP50-202ENST00000396096 ADGRA3Q8IWK6 1321 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 PHACTR2O75167 634 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 ATG7O95352 703 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 GZMAP12544 262 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 ABCB4P21439 1286 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 SCP2P22307 547 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 CYP24A1Q07973 514 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 XKR3Q5GH77 459 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 C11orf63Q6NUN7 778 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 TRMT1LQ7Z2T5 733 aaKnown RBP18.14■□□□□ 0.49
NUP50-202ENST00000396096 WHAMMQ8TF30 809 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 SEMA4DQ92854 862 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 SLITRK6Q9H5Y7 841 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 FAM204AQ9H8W3 233 aa18.14■□□□□ 0.49
NUP50-202ENST00000396096 RTN2O75298 545 aa18.13■□□□□ 0.49
NUP50-202ENST00000396096 MTA2O94776 668 aa18.13■□□□□ 0.49
NUP50-202ENST00000396096 CHRNB2P17787 502 aa18.13■□□□□ 0.49
NUP50-202ENST00000396096 MAP2K1Q02750 393 aaPredicted RBP18.13■□□□□ 0.49
NUP50-202ENST00000396096 KLHL7Q8IXQ5 586 aa18.13■□□□□ 0.49
NUP50-202ENST00000396096 RPUSD2Q8IZ73 545 aaKnown RBP18.13■□□□□ 0.49
NUP50-202ENST00000396096 GPC2Q8N158 579 aa18.13■□□□□ 0.49
NUP50-202ENST00000396096 TSEN2Q8NCE0 465 aaKnown RBP18.13■□□□□ 0.49
NUP50-202ENST00000396096 HELQQ8TDG4 1101 aa18.13■□□□□ 0.49
NUP50-202ENST00000396096 EPS8L1Q8TE68 723 aa18.13■□□□□ 0.49
NUP50-202ENST00000396096 KAT5Q92993 513 aa18.13■□□□□ 0.49
NUP50-202ENST00000396096 CARD9Q9H257 536 aa18.13■□□□□ 0.49
NUP50-202ENST00000396096 SEPT11Q9NVA2 429 aaKnown RBP18.13■□□□□ 0.49
NUP50-202ENST00000396096 SEPT9Q9UHD8 586 aaPredicted RBP18.13■□□□□ 0.49
NUP50-202ENST00000396096 NFU1Q9UMS0 254 aa18.13■□□□□ 0.49
NUP50-202ENST00000396096 TELO2Q9Y4R8 837 aa18.13■□□□□ 0.49
NUP50-202ENST00000396096 ZSCAN5CA6NGD5 496 aaPredicted RBP18.12■□□□□ 0.49
NUP50-202ENST00000396096 ERICH4A6NGS2 130 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 LMAN1P49257 510 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 HIRAP54198 1017 aaPredicted RBP18.12■□□□□ 0.49
NUP50-202ENST00000396096 SOX10P56693 466 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 GPD1LQ8N335 351 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 FBXL13Q8NEE6 735 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 AFAP1L1Q8TED9 768 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 IFT74Q96LB3 600 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 COG5Q9UP83 839 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 KRIT1O00522 736 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 OPA1O60313 960 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 USP2O75604 605 aaPredicted RBP18.12■□□□□ 0.49
NUP50-202ENST00000396096 SGPL1O95470 568 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 FTLP02792 175 aaPredicted RBP18.12■□□□□ 0.49
NUP50-202ENST00000396096 GPC5P78333 572 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 CUL1Q13616 776 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 STXBP2Q15833 593 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 CLUL1Q15846 466 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 TAS1R3Q7RTX0 852 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 NOP9Q86U38 636 aaKnown RBP18.12■□□□□ 0.49
NUP50-202ENST00000396096 RIN2Q8WYP3 895 aaPredicted RBP18.12■□□□□ 0.49
NUP50-202ENST00000396096 POMGNT1Q8WZA1 660 aa18.12■□□□□ 0.49
NUP50-202ENST00000396096 POLR3FQ9H1D9 316 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms