RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ZNHIT6Q9NWK9 470 aaKnown RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 GTF2IRD1Q9UHL9 959 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 C17orf102A2RUQ5 167 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 EIF3CLB5ME19 914 aaKnown RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 DGAT1O75907 488 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 EPB41P11171 864 aaKnown RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 ARHGAP25P42331 645 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 ATN1P54259 1190 aaPredicted RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 NCKAP1LP55160 1127 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 GTF2BQ00403 316 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 KCNH2Q12809 1159 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 HS2ST1Q7LGA3 356 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 NEK11Q8NG66 645 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 SLC35C1Q96A29 364 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 CEP89Q96ST8 783 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 EIF3CQ99613 913 aaKnown RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 POLD4Q9HCU8 107 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 PLCB1Q9NQ66 1216 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 FAM207AQ9NSI2 230 aaPredicted RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 MYO1AQ9UBC5 1043 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 COL1A2P08123 1366 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 EVPLQ92817 2033 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 RRN3P2A6NIE6 340 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 LCA5LO95447 670 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 GNAT1P11488 350 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 KLRC1P26715 233 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 RTP1P59025 263 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 ZNF200P98182 395 aaPredicted RBP16.48■□□□□ 0.23
SCAF11-204ENST00000395454 HIC1Q14526 733 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 METTL13Q8N6R0 699 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 ACRBPQ8NEB7 543 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 HVCN1Q96D96 273 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 PCMTD1Q96MG8 357 aaPredicted RBP16.48■□□□□ 0.23
SCAF11-204ENST00000395454 TMEM206Q9H813 350 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 MMRN2Q9H8L6 949 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 SUGCTQ9HAC7 445 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 C17orf75Q9HAS0 396 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 ATP6V0A4Q9HBG4 840 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 PDLIM7Q9NR12 457 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 DNAI1Q9UI46 699 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 FBXL5Q9UKA1 691 aa16.48■□□□□ 0.23
SCAF11-204ENST00000395454 TREHO43280 583 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 C22orf31O95567 290 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 AFPP02771 609 aaKnown RBP16.47■□□□□ 0.23
SCAF11-204ENST00000395454 CAPN2P17655 700 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 PSMC2P35998 433 aaKnown RBP16.47■□□□□ 0.23
SCAF11-204ENST00000395454 CASP4P49662 377 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 EMC2Q15006 297 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 MARCH8Q5T0T0 291 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 GDF6Q6KF10 455 aaPredicted RBP16.47■□□□□ 0.23
SCAF11-204ENST00000395454 PDXDC1Q6P996 788 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 MTHFD1LQ6UB35 978 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 NECAB2Q7Z6G3 386 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 TNS4Q8IZW8 715 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 LRRC71Q8N4P6 559 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 CCDC155Q8N6L0 562 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 WDR24Q96S15 920 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 GANQ9H2C0 597 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 C11orf49Q9H6J7 331 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 DHX33Q9H6R0 707 aaKnown RBP16.47■□□□□ 0.23
SCAF11-204ENST00000395454 PPME1Q9Y570 386 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 CCDC85CA6NKD9 419 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 ARVCFO00192 962 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 COL6A1P12109 1028 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 CYLC1P35663 651 aaPredicted RBP16.47■□□□□ 0.23
SCAF11-204ENST00000395454 RFC5P40937 340 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 SOX10P56693 466 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 SESTD1Q86VW0 696 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 NTPCRQ9BSD7 190 aaKnown RBP16.47■□□□□ 0.23
SCAF11-204ENST00000395454 NHEJ1Q9H9Q4 299 aaPredicted RBP16.47■□□□□ 0.23
SCAF11-204ENST00000395454 TRMT13Q9NUP7 481 aaKnown RBP16.47■□□□□ 0.23
SCAF11-204ENST00000395454 NOD1Q9Y239 953 aa16.47■□□□□ 0.23
SCAF11-204ENST00000395454 SIP14410 1827 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 K7ENM7 598 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 MAGEB2O15479 319 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 MAFO75444 373 aaPredicted RBP16.46■□□□□ 0.23
SCAF11-204ENST00000395454 HOXC8P31273 242 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 GNG11P61952 73 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 KRT83P78385 493 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 MAPK8IP2Q13387 824 aaPredicted RBP16.46■□□□□ 0.23
SCAF11-204ENST00000395454 PPP2R5AQ15172 486 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 PTGISQ16647 500 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 FAM102BQ5T8I3 360 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 EFCAB12Q6NXP0 572 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 EXOC8Q8IYI6 725 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 MCPH1Q8NEM0 835 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 SPIRE2Q8WWL2 714 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 KIFAP3Q92845 792 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 ARHGAP20Q9P2F6 1191 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 MYO6Q9UM54 1294 aa16.46■□□□□ 0.23
SCAF11-204ENST00000395454 A0A0U1RQJ8 604 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 SSU72P8A0A1W2PR75 194 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 MBLAC1A4D2B0 266 aaPredicted RBP16.45■□□□□ 0.22
SCAF11-204ENST00000395454 LRRC53A6NM62 1247 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 MAPK13O15264 365 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 CLCN3P51790 818 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 ADAM17P78536 824 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 ASTE1Q2TB18 679 aaPredicted RBP16.45■□□□□ 0.22
SCAF11-204ENST00000395454 SLC39A5Q6ZMH5 540 aa16.45■□□□□ 0.22
SCAF11-204ENST00000395454 FAM186BQ8IYM0 893 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms