RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 KRT17Q04695 432 aa15.08■□□□□ 0
SCAF11-203ENST00000395453 POU5F1BQ06416 359 aa15.08■□□□□ 0
SCAF11-203ENST00000395453 EMC2Q15006 297 aa15.08■□□□□ 0
SCAF11-203ENST00000395453 MRPL10Q7Z7H8 261 aaKnown RBP15.08■□□□□ 0
SCAF11-203ENST00000395453 SLC39A11Q8N1S5 342 aa15.08■□□□□ 0
SCAF11-203ENST00000395453 ADAM7Q9H2U9 754 aa15.08■□□□□ 0
SCAF11-203ENST00000395453 POMKQ9H5K3 350 aa15.08■□□□□ 0
SCAF11-203ENST00000395453 ZNF292O60281 2723 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 MEIS3P2A8K0S8 358 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 HIDE1A8MVS5 230 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 OFD1O75665 1012 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 XRCC6P12956 609 aaKnown RBP eCLIP15.07■□□□□ 0
SCAF11-203ENST00000395453 TXKP42681 527 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 MTHFRP42898 656 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 ALDH7A1P49419 539 aaKnown RBP15.07■□□□□ 0
SCAF11-203ENST00000395453 FOSBP53539 338 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 BCAR1P56945 870 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 MXD4Q14582 209 aaPredicted RBP15.07■□□□□ 0
SCAF11-203ENST00000395453 C8orf34Q49A92 452 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 TMC7Q7Z402 723 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 CCDC83Q8IWF9 413 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 LPPQ93052 612 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 MTRQ99707 1265 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 TMEM60Q9H2L4 133 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 PCDHB2Q9Y5E7 798 aa15.07■□□□□ 0
SCAF11-203ENST00000395453 DMXL1Q9Y485 3027 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 CARNS1A5YM72 827 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 SPATA31C1P0DKV0 1188 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 PTENP60484 403 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 PCBP1Q15365 356 aaKnown RBP eCLIP15.06■□□□□ 0
SCAF11-203ENST00000395453 SAFBQ15424 915 aaKnown RBP eCLIP15.06■□□□□ 0
SCAF11-203ENST00000395453 NOMO2Q5JPE7 1267 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 UBXN11Q5T124 520 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 GLB1LQ6UWU2 654 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 AGMOQ6ZNB7 445 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 IFNLR1Q8IU57 520 aaPredicted RBP15.06■□□□□ 0
SCAF11-203ENST00000395453 ZDHHC14Q8IZN3 488 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 MRPL43Q8N983 215 aaKnown RBP15.06■□□□□ 0
SCAF11-203ENST00000395453 RNF149Q8NC42 400 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 FBXO18Q8NFZ0 1043 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 C8orf76Q96K31 380 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 ZSCAN31Q96LW9 406 aaPredicted RBP15.06■□□□□ 0
SCAF11-203ENST00000395453 FOXP1Q9H334 677 aaPredicted RBP15.06■□□□□ 0
SCAF11-203ENST00000395453 SMOC2Q9H3U7 446 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 TBC1D13Q9NVG8 400 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 CDH22Q9UJ99 828 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 HCFC2Q9Y5Z7 792 aa15.06■□□□□ 0
SCAF11-203ENST00000395453 NT5C1B-RDH14C9J2C7 533 aa15.05■□□□□ -0
SCAF11-203ENST00000395453 DGAT1O75907 488 aa15.05■□□□□ -0
SCAF11-203ENST00000395453 ASGR2P07307 311 aa15.05■□□□□ -0
SCAF11-203ENST00000395453 MCM7P33993 719 aa15.05■□□□□ -0
SCAF11-203ENST00000395453 ARL2P36404 184 aa15.05■□□□□ -0
SCAF11-203ENST00000395453 RARRES1P49788 294 aa15.05■□□□□ -0
SCAF11-203ENST00000395453 GUCY1B3Q02153 619 aa15.05■□□□□ -0
SCAF11-203ENST00000395453 ORC2Q13416 577 aaPredicted RBP15.05■□□□□ -0
SCAF11-203ENST00000395453 LONRF3Q496Y0 759 aa15.05■□□□□ -0
SCAF11-203ENST00000395453 TDRD5Q8NAT2 981 aaKnown RBP15.05■□□□□ -0
SCAF11-203ENST00000395453 FLCNQ8NFG4 579 aa15.05■□□□□ -0
SCAF11-203ENST00000395453 PGBD4Q96DM1 585 aa15.05■□□□□ -0
SCAF11-203ENST00000395453 NRDE2Q9H7Z3 1164 aa15.05■□□□□ -0
SCAF11-203ENST00000395453 SH2B1Q9NRF2 756 aaPredicted RBP15.05■□□□□ -0
SCAF11-203ENST00000395453 LIMD1Q9UGP4 676 aa15.05■□□□□ -0
SCAF11-203ENST00000395453 C2orf71A6NGG8 1288 aa15.04■□□□□ -0
SCAF11-203ENST00000395453 GALTP07902 379 aa15.04■□□□□ -0
SCAF11-203ENST00000395453 AXLP30530 894 aa15.04■□□□□ -0
SCAF11-203ENST00000395453 HMGN5P82970 282 aaKnown RBP15.04■□□□□ -0
SCAF11-203ENST00000395453 SMC1AQ14683 1233 aaKnown RBP15.04■□□□□ -0
SCAF11-203ENST00000395453 TMEM173Q86WV6 379 aaPredicted RBP15.04■□□□□ -0
SCAF11-203ENST00000395453 PIGOQ8TEQ8 1089 aa15.04■□□□□ -0
SCAF11-203ENST00000395453 NFKBIZQ9BYH8 718 aa15.04■□□□□ -0
SCAF11-203ENST00000395453 TUFT1Q9NNX1 390 aa15.04■□□□□ -0
SCAF11-203ENST00000395453 USTQ9Y2C2 406 aa15.04■□□□□ -0
SCAF11-203ENST00000395453 CACNA1BQ00975 2339 aa15.04■□□□□ -0
SCAF11-203ENST00000395453 A0A087WWV3 80 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 B4GALT3O60512 393 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 ZC3H11AO75152 810 aaKnown RBP eCLIP15.03■□□□□ -0
SCAF11-203ENST00000395453 NCLP19338 710 aaKnown RBP15.03■□□□□ -0
SCAF11-203ENST00000395453 AOC1P19801 751 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 ATP2B1P20020 1258 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 RBM25P49756 843 aaKnown RBP15.03■□□□□ -0
SCAF11-203ENST00000395453 CAPSQ13938 189 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 TFDP1Q14186 410 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 BMS1Q14692 1282 aaKnown RBP15.03■□□□□ -0
SCAF11-203ENST00000395453 AMHR2Q16671 573 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 ATAT1Q5SQI0 421 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 CWF19L1Q69YN2 538 aaKnown RBP15.03■□□□□ -0
SCAF11-203ENST00000395453 DDX53Q86TM3 631 aaKnown RBP15.03■□□□□ -0
SCAF11-203ENST00000395453 CATSPER3Q86XQ3 398 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 ZNF280BQ86YH2 543 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 CCDC105Q8IYK2 499 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 SMG8Q8ND04 991 aaKnown RBP15.03■□□□□ -0
SCAF11-203ENST00000395453 ASAP3Q8TDY4 903 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 TMEM169Q96HH4 297 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 IGSF21Q96ID5 467 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 POLR3CQ9BUI4 534 aaPredicted RBP15.03■□□□□ -0
SCAF11-203ENST00000395453 SEMA4AQ9H3S1 761 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 KANSL3Q9P2N6 904 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 DNAJB4Q9UDY4 337 aa15.03■□□□□ -0
SCAF11-203ENST00000395453 DBR1Q9UK59 544 aaKnown RBP15.03■□□□□ -0
SCAF11-203ENST00000395453 IRAK3Q9Y616 596 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms