RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 FAM178BQ8IXR5 827 aa21.9■■□□□ 1.1
SNCA-203ENST00000394986 CEP57L1Q8IYX8 460 aa21.9■■□□□ 1.1
SNCA-203ENST00000394986 FIBCD1Q8N539 461 aa21.9■■□□□ 1.1
SNCA-203ENST00000394986 CASD1Q96PB1 797 aa21.9■■□□□ 1.1
SNCA-203ENST00000394986 TARS2Q9BW92 718 aaKnown RBP21.9■■□□□ 1.1
SNCA-203ENST00000394986 APOL6Q9BWW8 343 aa21.9■■□□□ 1.1
SNCA-203ENST00000394986 RNF39Q9H2S5 420 aa21.9■■□□□ 1.1
SNCA-203ENST00000394986 NXF3Q9H4D5 531 aaKnown RBP21.9■■□□□ 1.1
SNCA-203ENST00000394986 MRPL42Q9Y6G3 142 aaKnown RBP21.9■■□□□ 1.1
SNCA-203ENST00000394986 EPOPA6NHQ4 379 aa21.89■■□□□ 1.1
SNCA-203ENST00000394986 N4BP3O15049 544 aa21.89■■□□□ 1.1
SNCA-203ENST00000394986 ZNF623O75123 536 aa21.89■■□□□ 1.1
SNCA-203ENST00000394986 EOMESO95936 686 aa21.89■■□□□ 1.1
SNCA-203ENST00000394986 SLFN14P0C7P3 912 aa21.89■■□□□ 1.1
SNCA-203ENST00000394986 ASIC1P78348 528 aa21.89■■□□□ 1.1
SNCA-203ENST00000394986 AGMOQ6ZNB7 445 aa21.89■■□□□ 1.1
SNCA-203ENST00000394986 MRPL10Q7Z7H8 261 aaKnown RBP21.89■■□□□ 1.1
SNCA-203ENST00000394986 CMTR2Q8IYT2 770 aaKnown RBP21.89■■□□□ 1.1
SNCA-203ENST00000394986 ARNTL2Q8WYA1 636 aa21.89■■□□□ 1.1
SNCA-203ENST00000394986 PYM1Q9BRP8 204 aaKnown RBP21.89■■□□□ 1.1
SNCA-203ENST00000394986 TRIM6Q9C030 488 aaPredicted RBP21.89■■□□□ 1.1
SNCA-203ENST00000394986 MAGEF1Q9HAY2 307 aa21.89■■□□□ 1.1
SNCA-203ENST00000394986 PANK4Q9NVE7 773 aa21.89■■□□□ 1.1
SNCA-203ENST00000394986 RNF216Q9NWF9 866 aaPredicted RBP21.89■■□□□ 1.1
SNCA-203ENST00000394986 CDH23Q9H251 3354 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 FRMD3A2A2Y4 597 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 GOLGA6L4A6NEF3 574 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 LINC00271P0C7V0 271 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 SKIP12755 728 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 STRN3Q13033 797 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 ZC2HC1CQ53FD0 456 aaPredicted RBP21.89■■□□□ 1.09
SNCA-203ENST00000394986 HPS3Q969F9 1004 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 GUCD1Q96NT3 240 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 ACO2Q99798 780 aaKnown RBP21.89■■□□□ 1.09
SNCA-203ENST00000394986 MRPL4Q9BYD3 311 aaKnown RBP21.89■■□□□ 1.09
SNCA-203ENST00000394986 FGFBP2Q9BYJ0 223 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 TMEM117Q9H0C3 514 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 PRDM12Q9H4Q4 367 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 MTMR10Q9NXD2 777 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 KCNG1Q9UIX4 513 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 INPP5FQ9Y2H2 1132 aa21.89■■□□□ 1.09
SNCA-203ENST00000394986 RFXAPO00287 272 aa21.88■■□□□ 1.09
SNCA-203ENST00000394986 GAP43P17677 238 aa21.88■■□□□ 1.09
SNCA-203ENST00000394986 AMPD3Q01432 767 aa21.88■■□□□ 1.09
SNCA-203ENST00000394986 COASYQ13057 564 aa21.88■■□□□ 1.09
SNCA-203ENST00000394986 CUL4BQ13620 913 aa21.88■■□□□ 1.09
SNCA-203ENST00000394986 HERC4Q5GLZ8 1057 aaPredicted RBP21.88■■□□□ 1.09
SNCA-203ENST00000394986 ABI1Q8IZP0 508 aa21.88■■□□□ 1.09
SNCA-203ENST00000394986 PGBD4Q96DM1 585 aa21.88■■□□□ 1.09
SNCA-203ENST00000394986 PAGE5Q96GU1 130 aa21.88■■□□□ 1.09
SNCA-203ENST00000394986 TGS1Q96RS0 853 aaKnown RBP21.88■■□□□ 1.09
SNCA-203ENST00000394986 C7orf25Q9BPX7 421 aa21.88■■□□□ 1.09
SNCA-203ENST00000394986 LRRC27Q9C0I9 530 aa21.88■■□□□ 1.09
SNCA-203ENST00000394986 CHD7Q9P2D1 2997 aa21.87■■□□□ 1.09
SNCA-203ENST00000394986 H0YCG3 227 aa21.87■■□□□ 1.09
SNCA-203ENST00000394986 HOXA2O43364 376 aa21.87■■□□□ 1.09
SNCA-203ENST00000394986 GADD45BO75293 160 aaPredicted RBP21.87■■□□□ 1.09
SNCA-203ENST00000394986 ITGA4P13612 1032 aa21.87■■□□□ 1.09
SNCA-203ENST00000394986 AKAP5P24588 427 aa21.87■■□□□ 1.09
SNCA-203ENST00000394986 AFF1P51825 1210 aaKnown RBP21.87■■□□□ 1.09
SNCA-203ENST00000394986 ERVK-21P61565 698 aa21.87■■□□□ 1.09
SNCA-203ENST00000394986 LRRC55Q6ZSA7 311 aa21.87■■□□□ 1.09
SNCA-203ENST00000394986 ZBTB33Q86T24 672 aa21.87■■□□□ 1.09
SNCA-203ENST00000394986 ZBTB45Q96K62 511 aaPredicted RBP21.87■■□□□ 1.09
SNCA-203ENST00000394986 MRPL44Q9H9J2 332 aaKnown RBP21.87■■□□□ 1.09
SNCA-203ENST00000394986 RSAD1Q9HA92 442 aa21.87■■□□□ 1.09
SNCA-203ENST00000394986 TBX20Q9UMR3 447 aa21.87■■□□□ 1.09
SNCA-203ENST00000394986 TNFSF13BQ9Y275 285 aa21.87■■□□□ 1.09
SNCA-203ENST00000394986 OFD1O75665 1012 aa21.86■■□□□ 1.09
SNCA-203ENST00000394986 PRR29P0C7W0 189 aa21.86■■□□□ 1.09
SNCA-203ENST00000394986 MYBP10242 640 aa21.86■■□□□ 1.09
SNCA-203ENST00000394986 HARSP12081 509 aaKnown RBP21.86■■□□□ 1.09
SNCA-203ENST00000394986 CASP5P51878 434 aa21.86■■□□□ 1.09
SNCA-203ENST00000394986 CCDC65Q8IXS2 484 aa21.86■■□□□ 1.09
SNCA-203ENST00000394986 BICD1Q96G01 975 aa21.86■■□□□ 1.09
SNCA-203ENST00000394986 CDX2Q99626 313 aaPredicted RBP21.86■■□□□ 1.09
SNCA-203ENST00000394986 ADPGKQ9BRR6 497 aa21.86■■□□□ 1.09
SNCA-203ENST00000394986 CDT1Q9H211 546 aa21.86■■□□□ 1.09
SNCA-203ENST00000394986 IKZF4Q9H2S9 585 aa21.86■■□□□ 1.09
SNCA-203ENST00000394986 PTPRHQ9HD43 1115 aa21.86■■□□□ 1.09
SNCA-203ENST00000394986 TYW1Q9NV66 732 aaKnown RBP21.86■■□□□ 1.09
SNCA-203ENST00000394986 ANKFY1Q9P2R3 1169 aa21.86■■□□□ 1.09
SNCA-203ENST00000394986 SEL1LQ9UBV2 794 aa21.86■■□□□ 1.09
SNCA-203ENST00000394986 ABLIM1O14639 778 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 ZNF202O95125 648 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 CTNNB1P35222 781 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 GTF2BQ00403 316 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 ZNF568Q3ZCX4 644 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 CNNM4Q6P4Q7 775 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 GLB1LQ6UWU2 654 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 ZNF720Q7Z2F6 126 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 TMEM192Q8IY95 271 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 CEP120Q8N960 986 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 CNNM3Q8NE01 707 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 GLIS3Q8NEA6 775 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 GDPD5Q8WTR4 605 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 MYLIPQ8WY64 445 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 KCNN1Q92952 543 aa21.85■■□□□ 1.09
SNCA-203ENST00000394986 CLP1Q92989 425 aaKnown RBP21.85■■□□□ 1.09
SNCA-203ENST00000394986 ZFP42Q96MM3 310 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms