RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 FGFR4P22455 802 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 DRP2Q13474 957 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 PPP1R7Q15435 360 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 HSDL1Q3SXM5 330 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 CFAP58Q5T655 872 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 PHLDB3Q6NSJ2 640 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 PALB2Q86YC2 1186 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 NEK9Q8TD19 979 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 FRMPD4Q14CM0 1322 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 CCDC151A5D8V7 595 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 FZD9O00144 591 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 WEE2P0C1S8 567 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 ATF7P17544 494 aaPredicted RBP17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 HAUS1Q96CS2 278 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 CELF4Q9BZC1 486 aaKnown RBP17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 ADRB2P07550 413 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 ZNF280AP59817 542 aaPredicted RBP17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 SP2Q02086 613 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 MTM1Q13496 603 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 BRD3Q15059 726 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 LLGL2Q6P1M3 1020 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 FBXL13Q8NEE6 735 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 IQCDQ96DY2 449 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 PCDHA2Q9Y5H9 948 aa17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 BZW2Q9Y6E2 419 aaKnown RBP17.14■□□□□ 0.33
SMARCD1-202ENST00000394963 CCL15-CCL14A0A0B4J2E2 113 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 ZNF286BP0CG31 522 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 MEA1Q16626 185 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 CCL15Q16663 113 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 HYIQ5T013 277 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 WNK3Q9BYP7 1800 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 ARAP2Q8WZ64 1704 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 TAF1LQ8IZX4 1826 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 ERLIN2O94905 339 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 ZNF568Q3ZCX4 644 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 TMEM63BQ5T3F8 832 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 AADACL2Q6P093 401 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 SEPT1Q8WYJ6 367 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 TTYH3Q9C0H2 523 aa17.13■□□□□ 0.33
SMARCD1-202ENST00000394963 A0A1W2PQJ5 194 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 ANKRD65E5RJM6 399 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 SASH3O75995 380 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 MMEP08473 750 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 NSFP46459 744 aaKnown RBP17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 TMEM117Q9H0C3 514 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 ANKZF1Q9H8Y5 726 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 BUB1BO60566 1050 aaPredicted RBP17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 IFNB1P01574 187 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 UBA1P22314 1058 aaKnown RBP17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 MCM3P25205 808 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 ADCY1Q08828 1119 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 MAPK6Q16659 721 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 SV2AQ7L0J3 742 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 GPD1LQ8N335 351 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 PSPC1Q8WXF1 523 aaKnown RBP17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 DDX3XO00571 662 aaKnown RBP eCLIP17.12■□□□□ 0.333e-9■■■■□ 25.1
SMARCD1-202ENST00000394963 GJB6O95452 261 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 PRAMEF19Q5SWL8 479 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 ERO1BQ86YB8 467 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 STK33Q9BYT3 514 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 RAB20Q9NX57 234 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 ANAPC7Q9UJX3 599 aa17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 MORC2Q9Y6X9 1032 aaPredicted RBP17.12■□□□□ 0.33
SMARCD1-202ENST00000394963 SSU72P8A0A1W2PR75 194 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 F8VZ95 297 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 EIF3DO15371 548 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 DHX15O43143 795 aaKnown RBP17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 CELF2O95319 508 aaKnown RBP17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 VTNP04004 478 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 OATP04181 439 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 GUCY2CP25092 1073 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 NLRP11P59045 1033 aaKnown RBP17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 ZBTB41Q5SVQ8 909 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 SEL1L2Q5TEA6 688 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 TRAPPC11Q7Z392 1133 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 C4orf19Q8IY42 314 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 TTC16Q8NEE8 873 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 ACSF2Q96CM8 615 aaPredicted RBP17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 CNOT8Q9UFF9 292 aaKnown RBP17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 MYH4Q9Y623 1939 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 SUPT20HL2P0C7V6 817 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 ALDH5A1P51649 535 aaPredicted RBP17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 DYNLT1P63172 113 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 NEDD9Q14511 834 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 C7orf31Q8N865 590 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 MAGOHBQ96A72 148 aaKnown RBP17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 AGPAT1Q99943 283 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 PORCNQ9H237 461 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 DYNC1LI2O43237 492 aaPredicted RBP17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 CYP2B6P20813 491 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 PLTPP55058 493 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 IFT20Q8IY31 132 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 SPIRE2Q8WWL2 714 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 GPRASP2Q96D09 838 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 SUCLA2Q9P2R7 463 aaPredicted RBP17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 ASIC3Q9UHC3 531 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 CPA4Q9UI42 421 aa17.11■□□□□ 0.33
SMARCD1-202ENST00000394963 MAPK4P31152 587 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 LACTBP83111 547 aaPredicted RBP17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 CEP120Q8N960 986 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms