RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ABI1Q8IZP0 508 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 DAW1Q8N136 415 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 IGSF22Q8N9C0 903 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 LRRC15Q8TF66 581 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 ZFP42Q96MM3 310 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 NFKBIZQ9BYH8 718 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 FZD8Q9H461 694 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 NXF3Q9H4D5 531 aaKnown RBP9.84□□□□□ -0.83
ATG4A-205ENST00000394892 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.84□□□□□ -0.83
ATG4A-205ENST00000394892 MARCH5Q9NX47 278 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 MYH9P35579 1960 aaKnown RBP9.84□□□□□ -0.83
ATG4A-205ENST00000394892 TMEM221A6NGB7 291 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 INO80B-WBP1J3KQ70 363 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 M0R296 226 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 POMCP01189 267 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 SRGAP2BP0DMP2 458 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 CYP11B2P19099 503 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 PPM1AP35813 382 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 DSC1Q08554 894 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 ORC2Q13416 577 aaPredicted RBP9.83□□□□□ -0.84
ATG4A-205ENST00000394892 EEF1DP3Q658K8 133 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 ANKRD54Q6NXT1 300 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 LLGL2Q6P1M3 1020 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 PADI6Q6TGC4 694 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 DDX53Q86TM3 631 aaKnown RBP9.83□□□□□ -0.84
ATG4A-205ENST00000394892 COLGALT2Q8IYK4 626 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 VPS52Q8N1B4 723 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 FAM184AQ8NB25 1140 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 NACC1Q96RE7 527 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 GAD1Q99259 594 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 KIFC3Q9BVG8 833 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 APOL5Q9BWW9 433 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 MRPL9Q9BYD2 267 aaKnown RBP9.83□□□□□ -0.84
ATG4A-205ENST00000394892 CCDC113Q9H0I3 377 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 GBP3Q9H0R5 595 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 CSRNP2Q9H175 543 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 RSAD1Q9HA92 442 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 NGRNQ9NPE2 291 aaKnown RBP9.83□□□□□ -0.84
ATG4A-205ENST00000394892 ENTPD7Q9NQZ7 604 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 CACNG4Q9UBN1 327 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 PLXNA4Q9HCM2 1894 aa9.83□□□□□ -0.84
ATG4A-205ENST00000394892 A0A1B0GUA9 196 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 ARL5CA6NH57 179 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 LOC730098B7Z3J9 87 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 E9PMD0 336 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 NRP1O14786 923 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 ST18O60284 1047 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 CXCL14O95715 111 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 SKIP12755 728 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 EPCAMP16422 314 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 AKAP5P24588 427 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 GJB2P29033 226 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 CCT6AP40227 531 aaKnown RBP9.82□□□□□ -0.84
ATG4A-205ENST00000394892 MLH1P40692 756 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 ALDH7A1P49419 539 aaKnown RBP9.82□□□□□ -0.84
ATG4A-205ENST00000394892 SCNN1GP51170 649 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 ZXDAP98168 799 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 MAPK7Q13164 816 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 CBX2Q14781 532 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-205ENST00000394892 PTPN14Q15678 1187 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 NT5DC1Q5TFE4 455 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 PDE12Q6L8Q7 609 aaKnown RBP9.82□□□□□ -0.84
ATG4A-205ENST00000394892 TAS1R3Q7RTX0 852 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 TMC7Q7Z402 723 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 RNF168Q8IYW5 571 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-205ENST00000394892 C12orf76Q8N812 135 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-205ENST00000394892 SLC22A17Q8WUG5 538 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 RABGGTAQ92696 567 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 PNMA5Q96PV4 448 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 CDCA3Q99618 268 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-205ENST00000394892 RUSC1Q9BVN2 902 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 BHMT2Q9H2M3 363 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 PDZD7Q9H5P4 517 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 PUF60Q9UHX1 559 aaKnown RBP9.82□□□□□ -0.84
ATG4A-205ENST00000394892 KIAA1024Q9UPX6 916 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 HCFC2Q9Y5Z7 792 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 IRAK3Q9Y616 596 aa9.82□□□□□ -0.84
ATG4A-205ENST00000394892 LRRIQ4A6NIV6 560 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 MEFVO15553 781 aaPredicted RBP9.81□□□□□ -0.84
ATG4A-205ENST00000394892 NPTXRO95502 500 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 WEE2P0C1S8 567 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 CTSAP10619 480 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 ITGA4P13612 1032 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 AXLP30530 894 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 KRT17Q04695 432 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 GRIN1Q05586 938 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 TFDP1Q14186 410 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 PDIA5Q14554 519 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 NAB2Q15742 525 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 FAM187BQ17R55 369 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 NOTUMQ6P988 496 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 ZBTB33Q86T24 672 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 FBXL6Q8N531 539 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 PGBD4Q96DM1 585 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 CCDC51Q96ER9 411 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 PAAF1Q9BRP4 392 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 APOL6Q9BWW8 343 aa9.81□□□□□ -0.84
ATG4A-205ENST00000394892 PHF7Q9BWX1 381 aaPredicted RBP9.81□□□□□ -0.84
ATG4A-205ENST00000394892 DDX19AQ9NUU7 478 aaKnown RBP9.81□□□□□ -0.84
ATG4A-205ENST00000394892 KLK14Q9P0G3 267 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms