RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 PPP1R7Q15435 360 aa10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 TRPM8Q7Z2W7 1104 aa10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 PRELID2Q8N945 189 aa10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 GPATCH11Q8N954 259 aa10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 UIMC1Q96RL1 719 aa10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 MOV10L1Q9BXT6 1211 aaKnown RBP10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 QTRT2Q9H974 415 aaKnown RBP10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 ATP6V0A4Q9HBG4 840 aa10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 ARHGEF10LQ9HCE6 1279 aa10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 MCM8Q9UJA3 840 aa10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 GTF3C4Q9UKN8 822 aa10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 SLC12A4Q9UP95 1085 aa10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 PCDHA3Q9Y5H8 950 aa10.8□□□□□ -0.68
UBE2D3-208ENST00000394803 RPTORQ8N122 1335 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 DCDC2CA8MYV0 355 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 K7ENM7 598 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 FOXN3O00409 490 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 ENTPD3O75355 529 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 ITIH2P19823 946 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 RPL21P46778 160 aaKnown RBP10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 SCNN1DP51172 638 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 ZNF211Q13398 564 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 ZC2HC1CQ53FD0 456 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 TNFAIP8L3Q5GJ75 292 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 AMIGO3Q86WK7 504 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 SLC13A5Q86YT5 568 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 RPUSD2Q8IZ73 545 aaKnown RBP10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 ALG3Q92685 438 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 GLG1Q92896 1179 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 RNF25Q96BH1 459 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 TRIM11Q96F44 468 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 FIZ1Q96SL8 496 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 STRA6Q9BX79 667 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 EPB41L4BQ9H329 900 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 LRRC19Q9H756 370 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 ERVK-5Q9HDB9 667 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 COG5Q9UP83 839 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 EXOC7Q9UPT5 735 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 MYH11P35749 1972 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 SIPA1L1O43166 1804 aa10.79□□□□□ -0.68
UBE2D3-208ENST00000394803 SFI1A8K8P3 1242 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 GAS8O95995 478 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 TRIM49P0CI25 452 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 TRIM49CP0CI26 452 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 NPR1P16066 1061 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 PEX5P50542 639 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 EPC2Q52LR7 807 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 CEP55Q53EZ4 464 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 PHLDB3Q6NSJ2 640 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 XXYLT1Q8NBI6 393 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 CHURC1Q8WUH1 139 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 GRAMD1AQ96CP6 724 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 C18orf8Q96DM3 657 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 SCLT1Q96NL6 688 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 CCDC77Q9BR77 488 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 ZNF577Q9BSK1 485 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 DNAJC18Q9H819 358 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 CD248Q9HCU0 757 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 EMSYQ7Z589 1322 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 NDC80O14777 642 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 SHBGP04278 402 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 CYP1A2P05177 515 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 COMTP21964 271 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 ELF1P32519 619 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 MXI1P50539 228 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 ENPEPQ07075 957 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 NFIAQ12857 509 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 MESDQ14696 234 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 SLC27A3Q5K4L6 730 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 ADAT2Q7Z6V5 191 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 CEP57Q86XR8 500 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 DNAAF5Q86Y56 855 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 PROCA1Q8NCQ7 364 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 LMO3Q8TAP4 145 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 ZNF564Q8TBZ8 553 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 MDM1Q8TC05 714 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 HOOK2Q96ED9 719 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 RSRC1Q96IZ7 334 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 GJD4Q96KN9 370 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 P2RX7Q99572 595 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 FOXP3Q9BZS1 431 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 ST6GALNAC4Q9H4F1 302 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 VEZTQ9HBM0 779 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 TMOD4Q9NZQ9 345 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 DBR1Q9UK59 544 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 PRR12Q9ULL5 1215 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 TPX2Q9ULW0 747 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 NR2E1Q9Y466 385 aa10.78□□□□□ -0.68
UBE2D3-208ENST00000394803 TMEM110-MUSTN1A8MSY1 372 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 CHMP2AO43633 222 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 HIP1RO75146 1068 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 LRRN2O75325 713 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 ATP6V1G2O95670 118 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 HOXA13P31271 388 aaPredicted RBP10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 PDE6BP35913 854 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 SLC1A1P43005 524 aa10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 ELF3P78545 371 aaPredicted RBP10.77□□□□□ -0.68
UBE2D3-208ENST00000394803 MAP2K1Q02750 393 aaPredicted RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms