RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 NAGPAQ9UK23 515 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 AGTPBP1Q9UPW5 1226 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 GYG2O15488 501 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 CALUO43852 315 aaPredicted RBP9.45□□□□□ -0.9
RTN4-206ENST00000394611 GAS8O95995 478 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 GRAMD1BQ3KR37 738 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 PPP1R18Q6NYC8 613 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 EPM2AIP1Q7L775 607 aaPredicted RBP9.45□□□□□ -0.9
RTN4-206ENST00000394611 RAB3IPQ96QF0 476 aaPredicted RBP9.45□□□□□ -0.9
RTN4-206ENST00000394611 TCHPQ9BT92 498 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 SYNCQ9H7C4 482 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 MYO3BQ8WXR4 1341 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 RAD17O75943 681 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 MAP3K6O95382 1288 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 PLS3P13797 630 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 IL9RQ01113 521 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 UBAP2Q5T6F2 1119 aaKnown RBP9.44□□□□□ -0.9
RTN4-206ENST00000394611 RNF220Q5VTB9 566 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 MIGA2Q7L4E1 593 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 TRIM59Q8IWR1 403 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 PAPOLBQ9NRJ5 636 aaKnown RBP9.44□□□□□ -0.9
RTN4-206ENST00000394611 MYH6P13533 1939 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 K7ENM7 598 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 ZBED4O75132 1171 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 CD58P19256 250 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 SAT1P21673 171 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 GTF2IP78347 998 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 KRT17Q04695 432 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 BBS9Q3SYG4 887 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 MFSD14BQ5SR56 506 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 TMC3Q7Z5M5 1100 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 VGLL2Q8N8G2 317 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 KRT35Q92764 455 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 PLVAPQ9BX97 442 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 AGAP1Q9UPQ3 857 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 ZNF711Q9Y462 761 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 DLEC1Q9Y238 1755 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 LRP5O75197 1615 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 STK10O94804 968 aaKnown RBP9.44□□□□□ -0.9
RTN4-206ENST00000394611 GDF11O95390 407 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 MYL7Q01449 175 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 DALRD3Q5D0E6 543 aaKnown RBP9.44□□□□□ -0.9
RTN4-206ENST00000394611 C6orf118Q5T5N4 469 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 UTS2BQ765I0 119 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 SH3RF1Q7Z6J0 888 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 SPATA24Q86W54 205 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 CPNE8Q86YQ8 564 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 TTC8Q8TAM2 541 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 RAD54LQ92698 747 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 NAF1Q96HR8 494 aaKnown RBP9.44□□□□□ -0.9
RTN4-206ENST00000394611 FGD4Q96M96 766 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 GINM1Q9NU53 330 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 TAS2R14Q9NYV8 317 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 ANAPC7Q9UJX3 599 aa9.44□□□□□ -0.9
RTN4-206ENST00000394611 USP17L10C9JJH3 530 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 SKOR1P84550 965 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 RCN1Q15293 331 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 RNF207Q6ZRF8 634 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 SP8Q8IXZ3 490 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 ZFP69BQ9UJL9 534 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 PACSIN3Q9UKS6 424 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 SGK1O00141 431 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 ZBTB39O15060 712 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 SHOX2O60902 331 aaPredicted RBP9.43□□□□□ -0.9
RTN4-206ENST00000394611 NR3C1P04150 777 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 ESRRAP11474 423 aaPredicted RBP9.43□□□□□ -0.9
RTN4-206ENST00000394611 SOX11P35716 441 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 PRPHP41219 470 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 PIK3CAP42336 1068 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 COPS2P61201 443 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 LRRC63Q05C16 580 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 PPP2R5BQ15173 497 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 CASC4Q6P4E1 433 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 SLC20A1Q8WUM9 679 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 C7orf43Q8WVR3 580 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 TATDN2Q93075 761 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 ERGIC2Q96RQ1 377 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 FAM129AQ9BZQ8 928 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 C10orf88Q9H8K7 445 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 ERVK-5Q9HDB9 667 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 PPARGC1AQ9UBK2 798 aaKnown RBP9.43□□□□□ -0.9
RTN4-206ENST00000394611 SCAF8Q9UPN6 1271 aaKnown RBP9.43□□□□□ -0.9
RTN4-206ENST00000394611 ARHGEF35A5YM69 484 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 ORC4O43929 436 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 CIB2O75838 187 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 LUC7L3O95232 432 aaKnown RBP9.43□□□□□ -0.9
RTN4-206ENST00000394611 CPP00450 1065 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 ATP6V1B1P15313 513 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 USP11P51784 963 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 IRX1P78414 480 aaPredicted RBP9.43□□□□□ -0.9
RTN4-206ENST00000394611 CDR2Q01850 454 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 GRB10Q13322 594 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 DRP2Q13474 957 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 BYSLQ13895 437 aaKnown RBP9.43□□□□□ -0.9
RTN4-206ENST00000394611 COG2Q14746 738 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 SEC23AQ15436 765 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 TPCN2Q8NHX9 752 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 CAVIN3Q969G5 261 aa9.43□□□□□ -0.9
RTN4-206ENST00000394611 NUCKS1Q9H1E3 243 aaKnown RBP9.43□□□□□ -0.9
RTN4-206ENST00000394611 ARMCX1Q9P291 453 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms