RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 CLUL1Q15846 466 aa17.62■□□□□ 0.41
EFEMP1-202ENST00000394555 LINC00116Q8NCU8 138 aa17.62■□□□□ 0.41
EFEMP1-202ENST00000394555 TMEM237Q96Q45 408 aa17.62■□□□□ 0.41
EFEMP1-202ENST00000394555 SYT11Q9BT88 431 aa17.62■□□□□ 0.41
EFEMP1-202ENST00000394555 UBE2TQ9NPD8 197 aaPredicted RBP17.62■□□□□ 0.41
EFEMP1-202ENST00000394555 LAMB2P55268 1798 aa17.62■□□□□ 0.41
EFEMP1-202ENST00000394555 DDX60LQ5H9U9 1706 aaKnown RBP17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 ZBTB39O15060 712 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 HIP1RO75146 1068 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 GJB6O95452 261 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 ECEL1O95672 775 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 HSPA6P17066 643 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 RHBDL3P58872 404 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 MYL7Q01449 175 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 SPIRE1Q08AE8 756 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 BIRC2Q13490 618 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 ASRGL1Q7L266 308 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 CKAP2Q8WWK9 683 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 OSBPL1AQ9BXW6 950 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 ROPN1BQ9BZX4 212 aaPredicted RBP17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 ROPN1Q9HAT0 212 aaPredicted RBP17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 RABGAP1Q9Y3P9 1069 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 IRS2Q9Y4H2 1338 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 SNHG28P0DPA3 235 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 ARHGAP4P98171 946 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 CDCA2Q69YH5 1023 aaPredicted RBP17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 SLC13A5Q86YT5 568 aaPredicted RBP17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 CYP4X1Q8N118 509 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 CNKSR1Q969H4 720 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 NYXQ9GZU5 481 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 TAL1P17542 331 aaPredicted RBP17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 QRICH1Q2TAL8 776 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 MFSD14BQ5SR56 506 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 CGB2Q6NT52 195 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 NSMFQ6X4W1 530 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 TPTE2Q6XPS3 522 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 RNF207Q6ZRF8 634 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 VSIG1Q86XK7 387 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 ECHDC2Q86YB7 292 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 RPUSD2Q8IZ73 545 aaKnown RBP17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 NAF1Q96HR8 494 aaKnown RBP17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 ACP6Q9NPH0 428 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 ZMYND8Q9ULU4 1186 aaPredicted RBP17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 FRMD4BQ9Y2L6 1034 aa17.61■□□□□ 0.41
EFEMP1-202ENST00000394555 CLDN3O15551 220 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 TM4SF1P30408 202 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 GPC5P78333 572 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 KRT17Q04695 432 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 TRMT10CQ7L0Y3 403 aaKnown RBP17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 SPDYE1Q8NFV5 336 aaPredicted RBP17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 CYP2W1Q8TAV3 490 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 PARD3BQ8TEW8 1205 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 NAP1L4Q99733 375 aaKnown RBP17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 PITPNM3Q9BZ71 974 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 H0Y3Z8 333 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 O00370 1275 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 THAP12O43422 761 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 CHMP2AO43633 222 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 PDHA1P08559 390 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 PEX5P50542 639 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 BLMHQ13867 455 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 THEMIS2Q5TEJ8 643 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 INTS8Q75QN2 995 aaKnown RBP17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 ETNPPLQ8TBG4 499 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 FBF1Q8TES7 1133 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 SERPINB12Q96P63 405 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 P2RX7Q99572 595 aaKnown RBP17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 DNAJC18Q9H819 358 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 AAASQ9NRG9 546 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 NKIRAS1Q9NYS0 192 aa17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 CORO1CQ9ULV4 474 aaPredicted RBP17.6■□□□□ 0.41
EFEMP1-202ENST00000394555 ROBO1Q9Y6N7 1651 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 TARSP26639 723 aaKnown RBP17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 BMT2Q1RMZ1 405 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 USH1GQ495M9 461 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 MIGA2Q7L4E1 593 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 TPH2Q8IWU9 490 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 ATG4AQ8WYN0 398 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 MAST2Q6P0Q8 1798 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 DOT1LQ8TEK3 1739 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 FAM86B1E9PN63 330 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 FAM86B2P0C5J1 330 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 ATP5DP30049 168 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 PCK1P35558 622 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 NOVP48745 357 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 HS2ST1Q7LGA3 356 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 UTP4Q969X6 686 aaKnown RBP17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 PRKAG3Q9UGI9 489 aa17.59■□□□□ 0.41
EFEMP1-202ENST00000394555 KIF3CO14782 793 aa17.58■□□□□ 0.41
EFEMP1-202ENST00000394555 EXOC3O60645 756 aa17.58■□□□□ 0.41
EFEMP1-202ENST00000394555 UNC5CO95185 931 aa17.58■□□□□ 0.41
EFEMP1-202ENST00000394555 ALAS1P13196 640 aa17.58■□□□□ 0.41
EFEMP1-202ENST00000394555 C11orf63Q6NUN7 778 aa17.58■□□□□ 0.41
EFEMP1-202ENST00000394555 RINT1Q6NUQ1 792 aa17.58■□□□□ 0.41
EFEMP1-202ENST00000394555 CYFIP1Q7L576 1253 aa17.58■□□□□ 0.41
EFEMP1-202ENST00000394555 ANKLE1Q8NAG6 615 aa17.58■□□□□ 0.41
EFEMP1-202ENST00000394555 ERP27Q96DN0 273 aa17.58■□□□□ 0.41
EFEMP1-202ENST00000394555 MYLK2Q9H1R3 596 aa17.58■□□□□ 0.41
EFEMP1-202ENST00000394555 HAO1Q9UJM8 370 aa17.58■□□□□ 0.41
EFEMP1-202ENST00000394555 ZMYM2Q9UBW7 1377 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms