RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ARHGEF18Q6ZSZ5 1173 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 TRPM8Q7Z2W7 1104 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 PODNQ7Z5L7 613 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 NLGN1Q8N2Q7 840 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 KCNMB3Q9NPA1 279 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 SAYSD1Q9NPB0 183 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 RBAK-RBAKDNI3L0D1 243 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 CD58P19256 250 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 PIK3CAP42336 1068 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 PTENP60484 403 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 BRDTQ58F21 947 aaPredicted RBP17.27■□□□□ 0.36
PCDH1-203ENST00000394536 LDHDQ86WU2 507 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 PALB2Q86YC2 1186 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 PPP1R14CQ8TAE6 165 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 LRRC8CQ8TDW0 803 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 TGS1Q96RS0 853 aaKnown RBP17.27■□□□□ 0.36
PCDH1-203ENST00000394536 ECT2Q9H8V3 914 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 RAB20Q9NX57 234 aa17.27■□□□□ 0.36
PCDH1-203ENST00000394536 SLITRK3O94933 977 aa17.27■□□□□ 0.35
PCDH1-203ENST00000394536 GYS1P13807 737 aa17.27■□□□□ 0.35
PCDH1-203ENST00000394536 TNFRSF8P28908 595 aa17.27■□□□□ 0.35
PCDH1-203ENST00000394536 AMIGO3Q86WK7 504 aa17.27■□□□□ 0.35
PCDH1-203ENST00000394536 SEPT12Q8IYM1 358 aa17.27■□□□□ 0.35
PCDH1-203ENST00000394536 MREGQ8N565 214 aa17.27■□□□□ 0.35
PCDH1-203ENST00000394536 ALG3Q92685 438 aa17.27■□□□□ 0.35
PCDH1-203ENST00000394536 WNT8AQ9H1J5 351 aa17.27■□□□□ 0.35
PCDH1-203ENST00000394536 TUFT1Q9NNX1 390 aa17.27■□□□□ 0.35
PCDH1-203ENST00000394536 ASTN1O14525 1302 aa17.27■□□□□ 0.35
PCDH1-203ENST00000394536 SGK1O00141 431 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 ECE2O60344 883 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 CALCAP01258 141 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 SREBF1P36956 1147 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 RASA3Q14644 834 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 PLA2G4FQ68DD2 849 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 INTUQ9ULD6 942 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 MYH6P13533 1939 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 AKAP11Q9UKA4 1901 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 AGTP01019 485 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 PYGMP11217 842 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 NPR1P16066 1061 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 RPL21P46778 160 aaKnown RBP17.26■□□□□ 0.35
PCDH1-203ENST00000394536 DLG4P78352 724 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 MTMR1Q13613 665 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 CTAGE3PQ8IX95 158 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 ANKRD35Q8N283 1001 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 FAM163AQ96GL9 167 aaPredicted RBP17.26■□□□□ 0.35
PCDH1-203ENST00000394536 ETNK1Q9HBU6 452 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 RAVER2Q9HCJ3 691 aaKnown RBP17.26■□□□□ 0.35
PCDH1-203ENST00000394536 SEPT9Q9UHD8 586 aaPredicted RBP17.26■□□□□ 0.35
PCDH1-203ENST00000394536 AJAP1Q9UKB5 411 aaPredicted RBP17.26■□□□□ 0.35
PCDH1-203ENST00000394536 P4HBP07237 508 aaKnown RBP17.26■□□□□ 0.35
PCDH1-203ENST00000394536 QARSP47897 775 aaKnown RBP17.26■□□□□ 0.35
PCDH1-203ENST00000394536 PPP2R5AQ15172 486 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 SLC47A2Q86VL8 602 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 CCDC89Q8N998 374 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 ZSWIM1Q9BR11 485 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 ERVK-5Q9HDB9 667 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 ADAM22Q9P0K1 906 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 SERPINA10Q9UK55 444 aa17.26■□□□□ 0.35
PCDH1-203ENST00000394536 MYO5AQ9Y4I1 1855 aaKnown RBP17.25■□□□□ 0.35
PCDH1-203ENST00000394536 MYO3BQ8WXR4 1341 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 KRT19P08727 400 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 COILP38432 576 aaPredicted RBP17.25■□□□□ 0.35
PCDH1-203ENST00000394536 PRKG1Q13976 671 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 KRT39Q6A163 491 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 SLC13A5Q86YT5 568 aaPredicted RBP17.25■□□□□ 0.35
PCDH1-203ENST00000394536 CBWD2Q8IUF1 395 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 DHX38Q92620 1227 aaKnown RBP17.25■□□□□ 0.35
PCDH1-203ENST00000394536 SMC6Q96SB8 1091 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 POLR3CQ9BUI4 534 aaPredicted RBP17.25■□□□□ 0.35
PCDH1-203ENST00000394536 OPLAHO14841 1288 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 TGFB1I1O43294 461 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 ANXA13P27216 316 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 GCKP35557 465 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 ZRSR2Q15696 482 aaKnown RBP17.25■□□□□ 0.35
PCDH1-203ENST00000394536 FYB2Q5VWT5 728 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 SEPT14Q6ZU15 432 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 CD302Q8IX05 232 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 FAM167BQ9BTA0 163 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 ZNF341Q9BYN7 854 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 UNC45AQ9H3U1 944 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 LRRD1A4D1F6 860 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 DRP2Q13474 957 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 MTERF2Q49AM1 385 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 ANKRD20A8PQ5CZ79 823 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 PHLDB3Q6NSJ2 640 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 APOBEC3HQ6NTF7 200 aaKnown RBP17.25■□□□□ 0.35
PCDH1-203ENST00000394536 PALM2Q8IXS6 379 aa17.25■□□□□ 0.35
PCDH1-203ENST00000394536 DDX23Q9BUQ8 820 aaKnown RBP17.25■□□□□ 0.35
PCDH1-203ENST00000394536 PRKCIP41743 596 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 TRPC3Q13507 836 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 TMEM270Q6UE05 265 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 HHIPL2Q6UWX4 724 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 EPM2AIP1Q7L775 607 aaPredicted RBP17.24■□□□□ 0.35
PCDH1-203ENST00000394536 ARHGEF19Q8IW93 802 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 VPS52Q8N1B4 723 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 MCUR1Q96AQ8 359 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 FAM84AQ96KN4 292 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 MKNK1Q9BUB5 465 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 DUOX1Q9NRD9 1551 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms