RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 GPS1Q13098 491 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 E2F5Q15329 346 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 FAM47EQ6ZV65 393 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 SLC35G2Q8TBE7 412 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 VCPKMTQ9H867 229 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 INTS9Q9NV88 658 aaKnown RBP9.74□□□□□ -0.85
CDH11-202ENST00000394156 IRAK4Q9NWZ3 460 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 HERC5Q9UII4 1024 aaKnown RBP9.74□□□□□ -0.85
CDH11-202ENST00000394156 USP32Q8NFA0 1604 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 PHLPP2Q6ZVD8 1323 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 H0YCG3 227 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 ZBED1O96006 694 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 ALDH3A1P30838 453 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 ARL4AP40617 200 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 CASP8Q14790 479 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 ARFGAP2Q8N6H7 521 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 PPP4R1Q8TF05 950 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 TTC17Q96AE7 1141 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 TMEM117Q9H0C3 514 aa9.74□□□□□ -0.85
CDH11-202ENST00000394156 SKIV2LQ15477 1246 aaKnown RBP9.73□□□□□ -0.85
CDH11-202ENST00000394156 EML3Q32P44 896 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 LRRC8CQ8TDW0 803 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 PPM1EQ8WY54 764 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 MAP3K14Q99558 947 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 JRKLQ9Y4A0 524 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 CNTNAP4Q9C0A0 1308 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 GPR75-ASB3A0A0A6YYF3 556 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 TISP43B9A030 160 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 AGRPO00253 132 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 SPTLC1O15269 473 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 CPB1P15086 417 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 MSH2P43246 934 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 CLCN3P51790 818 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 ZNF579Q8NAF0 562 aaKnown RBP9.73□□□□□ -0.85
CDH11-202ENST00000394156 FMO2Q99518 471 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 PXDNLA1KZ92 1463 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 EXOC1LA0A1B0GW35 172 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 SYNDIG1LA6NDD5 238 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 MTMR3Q13615 1198 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 ANKRD20A3Q5VUR7 823 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 ANAPC4Q9UJX5 808 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.73□□□□□ -0.85
CDH11-202ENST00000394156 A0A0U1RQJ8 604 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 ATP9BO43861 1147 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 HUS1O60921 280 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 LRRC1Q9BTT6 524 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 TBC1D22BQ9NU19 505 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 TYW1Q9NV66 732 aaKnown RBP9.73□□□□□ -0.85
CDH11-202ENST00000394156 ELF1P32519 619 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 PDCLQ13371 301 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 GLIS3Q8NEA6 775 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 PYROXD1Q8WU10 500 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 TCP11Q8WWU5 503 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 NCAPGQ9BPX3 1015 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 TARS2Q9BW92 718 aaKnown RBP9.73□□□□□ -0.85
CDH11-202ENST00000394156 PACSIN1Q9BY11 444 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 ZMYND12Q9H0C1 365 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 NOC2LQ9Y3T9 749 aaKnown RBP9.73□□□□□ -0.85
CDH11-202ENST00000394156 hCG_1984214I3L0E3 225 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 NR3C2P08235 984 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 GPC5P78333 572 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 CXCL9Q07325 125 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 PCSK7Q16549 785 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 ZNF713Q8N859 430 aaPredicted RBP9.73□□□□□ -0.85
CDH11-202ENST00000394156 FAM20AQ96MK3 541 aa9.73□□□□□ -0.85
CDH11-202ENST00000394156 EMC2Q15006 297 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 SNRNP35Q16560 246 aaKnown RBP9.72□□□□□ -0.85
CDH11-202ENST00000394156 DDX42Q86XP3 938 aaKnown RBP eCLIP9.72□□□□□ -0.85
CDH11-202ENST00000394156 ATP2A3Q93084 1043 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 KLHL8Q9P2G9 620 aaPredicted RBP9.72□□□□□ -0.85
CDH11-202ENST00000394156 A0A087X0B3 334 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 CFLARO15519 480 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 TFRCP02786 760 aaKnown RBP9.72□□□□□ -0.85
CDH11-202ENST00000394156 KCNJ1P48048 391 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 EPHB1P54762 984 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 MMEL1Q495T6 779 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 ACAP3Q96P50 834 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 GOLGA8KD6RF30 607 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 SARNPP82979 210 aaKnown RBP9.72□□□□□ -0.85
CDH11-202ENST00000394156 FAM136AQ96C01 138 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 FAM84AQ96KN4 292 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 NUDT12Q9BQG2 462 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 SOX5P35711 763 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 ATXN3P54252 364 aaPredicted RBP9.72□□□□□ -0.85
CDH11-202ENST00000394156 RAD9BQ6WBX8 426 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 ATP6V1E2Q96A05 226 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 MXRA8Q9BRK3 442 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 IFT122Q9HBG6 1241 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 DBR1Q9UK59 544 aaKnown RBP9.72□□□□□ -0.85
CDH11-202ENST00000394156 VCAM1P19320 739 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 SERPINB6P35237 376 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 IQCB1Q15051 598 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 SPATA24Q86W54 205 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 CACNA2D3Q8IZS8 1091 aa9.72□□□□□ -0.85
CDH11-202ENST00000394156 SEPT5Q99719 369 aaPredicted RBP9.72□□□□□ -0.85
CDH11-202ENST00000394156 TRIM56Q9BRZ2 755 aaKnown RBP9.72□□□□□ -0.85
CDH11-202ENST00000394156 TIMM13Q9Y5L4 95 aaPredicted RBP9.72□□□□□ -0.85
CDH11-202ENST00000394156 PPP1R3GB7ZBB8 358 aa9.71□□□□□ -0.85
CDH11-202ENST00000394156 EYA4O95677 639 aa9.71□□□□□ -0.85
CDH11-202ENST00000394156 MYL1P05976 194 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms