RNA–Protein interactions for RNA: ENST00000393868.6

SUCLG1-201, Transcript of succinate-CoA ligase alpha subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUCLG1, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-201ENST00000393868 RNF114Q9Y508 228 aa6.98□□□□□ -1.29
SUCLG1-201ENST00000393868 PCDHA11Q9Y5I1 949 aa6.98□□□□□ -1.29
SUCLG1-201ENST00000393868 PLIN4Q96Q06 1357 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 BTBD18B2RXH4 712 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 MMP1P03956 469 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 RAC2P15153 192 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 VEGFAP15692 232 aaPredicted RBP6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 STK38Q15208 465 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 SF3A1Q15459 793 aaKnown RBP6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 PFKFB3Q16875 520 aaPredicted RBP6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 DCAF15Q66K64 600 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 DLK2Q6UY11 383 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 SIAH1Q8IUQ4 282 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 SPICE1Q8N0Z3 855 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 ZNF655Q8N720 491 aaPredicted RBP6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 ACER1Q8TDN7 264 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 FAM168AQ92567 244 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 DCPSQ96C86 337 aaKnown RBP6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 TEPSINQ96N21 525 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 PIGSQ96S52 555 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 HDAC8Q9BY41 377 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 FTOQ9C0B1 505 aaKnown RBP eCLIP6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 SCAND2PQ9GZW5 306 aaPredicted RBP6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 ADARB2Q9NS39 739 aaKnown RBP6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 PGAP2Q9UHJ9 254 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 TMEM59LQ9UK28 342 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 CFAP45Q9UL16 551 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 ZBTB21Q9ULJ3 1066 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 FZD1Q9UP38 647 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 PCDHB12Q9Y5F1 795 aa6.97□□□□□ -1.29
SUCLG1-201ENST00000393868 FER1L6Q2WGJ9 1857 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 F5H6K3 240 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 SIGLEC6O43699 453 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 CYTH3O43739 400 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 NDUFB10O96000 172 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 KRT2P35908 639 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 ECE1P42892 770 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 GIPRP48546 466 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 NOVP48745 357 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 SNAP25P60880 206 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 KLRC3Q07444 240 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 ZNF543Q08ER8 600 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 SNW1Q13573 536 aaKnown RBP6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 SLC35G1Q2M3R5 365 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 BBS9Q3SYG4 887 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 ASPRV1Q53RT3 343 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 WWC2Q6AWC2 1192 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 UNC5AQ6ZN44 842 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 RUFY4Q6ZNE9 571 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 BRAPQ7Z569 592 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 TMC3Q7Z5M5 1100 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 C19orf47Q8N9M1 422 aaKnown RBP6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 SMC1BQ8NDV3 1235 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 DCAF4Q8WV16 495 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 LEO1Q8WVC0 666 aaPredicted RBP6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 DHX38Q92620 1227 aaKnown RBP6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 MKL1Q969V6 931 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 USP28Q96RU2 1077 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 FEZ1Q99689 392 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 ZNF341Q9BYN7 854 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 PRDM14Q9GZV8 571 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 CAPN10Q9HC96 672 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 FBXL21Q9UKT6 434 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 CLIC4Q9Y696 253 aa6.96□□□□□ -1.3
SUCLG1-201ENST00000393868 DDX60LQ5H9U9 1706 aaKnown RBP6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 DNAJC25-GNG10A0A024R161 153 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 SSU72P8A0A1W2PR75 194 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 A0A1W2PRG0 241 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 TMEM232C9JQI7 657 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 ADM5C9JUS6 153 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 EPHX2P34913 555 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 ME1P48163 572 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 NAPAP54920 295 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 UBE2HP62256 183 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 AUHQ13825 339 aaKnown RBP6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 SUPT20HL1Q3ZLR7 823 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 RALGPS1Q5JS13 557 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 CAVIN1Q6NZI2 390 aaKnown RBP6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 RNF111Q6ZNA4 994 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 ZSWIM9Q86XI8 627 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 NOSTRINQ8IVI9 506 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 ADGRF4Q8IZF3 695 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 BICD2Q8TD16 824 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 GPT2Q8TD30 523 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 COA7Q96BR5 231 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 SHISA4Q96DD7 197 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 HOOK2Q96ED9 719 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 WRNIP1Q96S55 665 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 PHF20Q9BVI0 1012 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 SPZ1Q9BXG8 430 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 GLIS2Q9BZE0 524 aaPredicted RBP6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 SH2D4AQ9H788 454 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 JMJD4Q9H9V9 463 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 C19orf73Q9NVV2 129 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 PRR13Q9NZ81 148 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 COL2A1P02458 1487 aaPredicted RBP6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 LAMB1P07942 1786 aa6.95□□□□□ -1.3
SUCLG1-201ENST00000393868 MYH1P12882 1939 aa6.94□□□□□ -1.3
SUCLG1-201ENST00000393868 BRCA1P38398 1863 aaKnown RBP6.94□□□□□ -1.3
SUCLG1-201ENST00000393868 SMCO2A6NFE2 343 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms