RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 PNKPQ96T60 521 aa11.9□□□□□ -0.5
CASP3-202ENST00000393585 TLR10Q9BXR5 811 aa11.9□□□□□ -0.5
CASP3-202ENST00000393585 NIFKQ9BYG3 293 aaKnown RBP11.9□□□□□ -0.5
CASP3-202ENST00000393585 PDGFCQ9NRA1 345 aa11.9□□□□□ -0.5
CASP3-202ENST00000393585 SMARCAL1Q9NZC9 954 aa11.9□□□□□ -0.5
CASP3-202ENST00000393585 EHD2Q9NZN4 543 aa11.9□□□□□ -0.5
CASP3-202ENST00000393585 PACSIN2Q9UNF0 486 aaPredicted RBP11.9□□□□□ -0.5
CASP3-202ENST00000393585 BMS1Q14692 1282 aaKnown RBP11.9□□□□□ -0.5
CASP3-202ENST00000393585 FAM160B1Q5W0V3 765 aa11.9□□□□□ -0.5
CASP3-202ENST00000393585 LMBRD2Q68DH5 695 aaPredicted RBP11.9□□□□□ -0.5
CASP3-202ENST00000393585 GPD1LQ8N335 351 aa11.9□□□□□ -0.5
CASP3-202ENST00000393585 ZBTB45Q96K62 511 aaPredicted RBP11.9□□□□□ -0.5
CASP3-202ENST00000393585 FBXL18Q96ME1 805 aa11.9□□□□□ -0.5
CASP3-202ENST00000393585 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.5
CASP3-202ENST00000393585 GOLPH3Q9H4A6 298 aa11.9□□□□□ -0.5
CASP3-202ENST00000393585 SEPT11Q9NVA2 429 aaKnown RBP11.9□□□□□ -0.5
CASP3-202ENST00000393585 NOP56O00567 594 aaKnown RBP11.9□□□□□ -0.51
CASP3-202ENST00000393585 P4HA2O15460 535 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 EDN1P05305 212 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 COPB2P35606 906 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 ARL2P36404 184 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 CBX1P83916 185 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 CYP24A1Q07973 514 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 TARBP2Q15633 366 aaKnown RBP11.9□□□□□ -0.51
CASP3-202ENST00000393585 PTPROQ16827 1216 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 TMCO3Q6UWJ1 677 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 PALB2Q86YC2 1186 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 CREG2Q8IUH2 290 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 PPM1KQ8N3J5 372 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 DEPTORQ8TB45 409 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 MPHOSPH6Q99547 160 aaKnown RBP11.9□□□□□ -0.51
CASP3-202ENST00000393585 GPR20Q99678 358 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 MROH8Q9H579 483 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 AZI2Q9H6S1 392 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 NRBP2Q9NSY0 501 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 NENFQ9UMX5 172 aa11.9□□□□□ -0.51
CASP3-202ENST00000393585 PDHXO00330 501 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 USP8P40818 1118 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 NAMPTP43490 491 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 NOP2P46087 812 aaKnown RBP11.89□□□□□ -0.51
CASP3-202ENST00000393585 STRN3Q13033 797 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 CELF3Q5SZQ8 465 aaKnown RBP11.89□□□□□ -0.51
CASP3-202ENST00000393585 KRT39Q6A163 491 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.89□□□□□ -0.51
CASP3-202ENST00000393585 DHX37Q8IY37 1157 aaKnown RBP11.89□□□□□ -0.51
CASP3-202ENST00000393585 TAS1R2Q8TE23 839 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 AFAP1L1Q8TED9 768 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 MFSD14AQ96MC6 490 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 SPATA33Q96N06 139 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 HAPLN2Q9GZV7 340 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 HYOU1Q9Y4L1 999 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 GRID2IPA4D2P6 1211 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 K7ERI5 159 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 GARTP22102 1010 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 ACOT2P49753 483 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 WNT7BP56706 349 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 C2orf54Q08AI8 447 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 CAPSQ13938 189 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 C10orf76Q5T2E6 689 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 GJC2Q5T442 439 aaPredicted RBP11.89□□□□□ -0.51
CASP3-202ENST00000393585 LRRC71Q8N4P6 559 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 SLC20A1Q8WUM9 679 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 SYT11Q9BT88 431 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 TARS2Q9BW92 718 aaKnown RBP11.89□□□□□ -0.51
CASP3-202ENST00000393585 SUGCTQ9HAC7 445 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 PCDHGC5Q9Y5F6 944 aa11.89□□□□□ -0.51
CASP3-202ENST00000393585 ZC3H4Q9UPT8 1303 aaKnown RBP11.88□□□□□ -0.51
CASP3-202ENST00000393585 CCL15-CCL14A0A0B4J2E2 113 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 BTBD19C9JJ37 291 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 H0YCG3 227 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 H2AFZP0C0S5 128 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 TXNP10599 105 aaKnown RBP11.88□□□□□ -0.51
CASP3-202ENST00000393585 NLRP11P59045 1033 aaKnown RBP11.88□□□□□ -0.51
CASP3-202ENST00000393585 CKAP4Q07065 602 aaKnown RBP11.88□□□□□ -0.51
CASP3-202ENST00000393585 CCL15Q16663 113 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 CC2D1AQ6P1N0 951 aaPredicted RBP11.88□□□□□ -0.51
CASP3-202ENST00000393585 H2AFVQ71UI9 128 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 SV2AQ7L0J3 742 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 MSANTD4Q8NCY6 345 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 SLC30A5Q8TAD4 765 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 TRAPPC12Q8WVT3 735 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 MS4A4AQ96JQ5 239 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 KREMEN1Q96MU8 473 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 TMEM8AQ9HCN3 771 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 ACP6Q9NPH0 428 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 TAS2R14Q9NYV8 317 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 ANKFY1Q9P2R3 1169 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 MAFO75444 373 aaPredicted RBP11.88□□□□□ -0.51
CASP3-202ENST00000393585 ZRANB2O95218 330 aaKnown RBP eCLIP11.88□□□□□ -0.51
CASP3-202ENST00000393585 HARSP12081 509 aaKnown RBP11.88□□□□□ -0.51
CASP3-202ENST00000393585 ABCB4P21439 1286 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 RFX1P22670 979 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 ANXA13P27216 316 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 RFC5P40937 340 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 MATR3P43243 847 aaKnown RBP eCLIP11.88□□□□□ -0.51
CASP3-202ENST00000393585 GALCP54803 685 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 VSNL1P62760 191 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 CCDC62Q6P9F0 684 aa11.88□□□□□ -0.51
CASP3-202ENST00000393585 ARMCX2Q7L311 632 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms