RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 FRMD3A2A2Y4 597 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 PI4K2BG5E9Z4 385 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 SYPP08247 313 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 SKIDA1Q1XH10 827 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 TAF1BQ53T94 588 aaPredicted RBP8.76□□□□□ -1.01
LIMS1-203ENST00000393310 CYFIP1Q7L576 1253 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 TMEM110Q86TL2 294 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 UHMK1Q8TAS1 419 aaKnown RBP8.76□□□□□ -1.01
LIMS1-203ENST00000393310 PI4K2BQ8TCG2 481 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 AGBL1Q96MI9 1066 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 ARPC5LQ9BPX5 153 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 RTKNQ9BST9 563 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 PPCSQ9HAB8 311 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 LUC7L2Q9Y383 392 aaKnown RBP8.76□□□□□ -1.01
LIMS1-203ENST00000393310 FARP1Q9Y4F1 1045 aaPredicted RBP8.76□□□□□ -1.01
LIMS1-203ENST00000393310 PCDHA10Q9Y5I2 948 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 CYP46A1Q9Y6A2 500 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 CDY2AQ9Y6F7 541 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 TIAM2Q8IVF5 1701 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 NDC80O14777 642 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 CYBBP04839 570 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 IDEP14735 1019 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 GLUD2P49448 558 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 EIF2B5Q13144 721 aaKnown RBP8.76□□□□□ -1.01
LIMS1-203ENST00000393310 MXD4Q14582 209 aaPredicted RBP8.76□□□□□ -1.01
LIMS1-203ENST00000393310 USP41Q3LFD5 358 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 EPC2Q52LR7 807 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 NOTUMQ6P988 496 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 CPLX3Q8WVH0 158 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 PMM1Q92871 262 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 UPF3AQ9H1J1 476 aaKnown RBP8.76□□□□□ -1.01
LIMS1-203ENST00000393310 POLMQ9NP87 494 aaPredicted RBP8.76□□□□□ -1.01
LIMS1-203ENST00000393310 CYP39A1Q9NYL5 469 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 PCDHB6Q9Y5E3 794 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 TRPM7Q96QT4 1865 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 MAGEC1O60732 1142 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 GMNNO75496 209 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 RRM1P23921 792 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 SHMT1P34896 483 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 CLCN5P51795 746 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 ZNF543Q08ER8 600 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 KRT79Q5XKE5 535 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 MICU3Q86XE3 530 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 RAB11FIP4Q86YS3 637 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.76□□□□□ -1.01
LIMS1-203ENST00000393310 PPP1R14BQ96C90 147 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 NLRP4Q96MN2 994 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 ARHGAP9Q9BRR9 750 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 SLC39A3Q9BRY0 314 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 C8orf33Q9H7E9 229 aaPredicted RBP8.76□□□□□ -1.01
LIMS1-203ENST00000393310 HAUS2Q9NVX0 235 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 TMEM161AQ9NX61 479 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 GTF2IRD1Q9UHL9 959 aa8.76□□□□□ -1.01
LIMS1-203ENST00000393310 LAD1O00515 517 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 TPPPO94811 219 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 RFC5P40937 340 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 GRSF1Q12849 480 aaKnown RBP eCLIP8.75□□□□□ -1.01
LIMS1-203ENST00000393310 TUBA3CQ13748 450 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 CBX2Q14781 532 aaPredicted RBP8.75□□□□□ -1.01
LIMS1-203ENST00000393310 MCTP1Q6DN14 999 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 CACTINQ8WUQ7 758 aaKnown RBP8.75□□□□□ -1.01
LIMS1-203ENST00000393310 SENP7Q9BQF6 1050 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 TSPY26PQ9H489 355 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 IP6K2Q9UHH9 426 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 RRP15Q9Y3B9 282 aaKnown RBP8.75□□□□□ -1.01
LIMS1-203ENST00000393310 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.75□□□□□ -1.01
LIMS1-203ENST00000393310 SMIM10L2AP0DMW4 78 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 SMIM10L2BP0DMW5 78 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 TUBA1BP68363 451 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 FAAP100Q0VG06 881 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 CETN1Q12798 172 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 XKR3Q5GH77 459 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 TUBA1AQ71U36 451 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 MRPS27Q92552 414 aaKnown RBP8.75□□□□□ -1.01
LIMS1-203ENST00000393310 ZFP14Q9HCL3 533 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 CARD8Q9Y2G2 431 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 ITGB4P16144 1822 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 ARPC4-TTLL3A0A0A6YYG9 625 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 MYMKA6NI61 221 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 LRRIQ4A6NIV6 560 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 EOMESO95936 686 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 RHOXF2BP0C7M4 288 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 AVPR1AP37288 418 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 SARSP49591 514 aaKnown RBP8.75□□□□□ -1.01
LIMS1-203ENST00000393310 PRKCQQ04759 706 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 SNX17Q15036 470 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 FAM126BQ8IXS8 530 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 ADSSL1Q8N142 457 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 EFHBQ8N7U6 833 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 SNRNP27Q8WVK2 155 aaKnown RBP8.75□□□□□ -1.01
LIMS1-203ENST00000393310 CEP170P1Q96L14 293 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 RHOXF2Q9BQY4 288 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 APOL5Q9BWW9 433 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 ZC4H2Q9NQZ6 224 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 TRMT13Q9NUP7 481 aaKnown RBP8.75□□□□□ -1.01
LIMS1-203ENST00000393310 UXTQ9UBK9 157 aaPredicted RBP8.75□□□□□ -1.01
LIMS1-203ENST00000393310 TRIM64CA6NLI5 447 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 CCDC169A6NNP5 214 aa8.75□□□□□ -1.01
LIMS1-203ENST00000393310 WDR5P61964 334 aaKnown RBP8.75□□□□□ -1.01
LIMS1-203ENST00000393310 FILIP1Q7Z7B0 1213 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms