RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 CBWD5Q5RIA9 395 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 KIF9Q9HAQ2 790 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 MYOZ2Q9NPC6 264 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 FZD1Q9UP38 647 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 STK38LQ9Y2H1 464 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 PCDHA10Q9Y5I2 948 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 CYP3A7-CYP3A51PA0A087WV96 503 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 A6NNZ2 444 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 NOL4O94818 638 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 PSAPP07602 524 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 FAM153BP0C7A2 387 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 PLS3P13797 630 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 CYP3A7P24462 503 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 HNRNPH3P31942 346 aaKnown RBP11.31□□□□□ -0.6
CALD1-203ENST00000393118 RANBP1P43487 201 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 IGBP1P78318 339 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 SNRNP35Q16560 246 aaKnown RBP11.31□□□□□ -0.6
CALD1-203ENST00000393118 TKFCQ3LXA3 575 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 TUBB8Q3ZCM7 444 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 FAM153CQ494X1 144 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 BRDTQ58F21 947 aaPredicted RBP11.31□□□□□ -0.6
CALD1-203ENST00000393118 MEI1Q5TIA1 1274 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 KRT39Q6A163 491 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 TATDN1Q6P1N9 297 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 CBWD2Q8IUF1 395 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 ANKS4BQ8N8V4 417 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 ZNF564Q8TBZ8 553 aaPredicted RBP11.31□□□□□ -0.6
CALD1-203ENST00000393118 PURBQ96QR8 312 aaKnown RBP11.31□□□□□ -0.6
CALD1-203ENST00000393118 PPP1R16BQ96T49 567 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 OLFML3Q9NRN5 406 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 FAM153AQ9UHL3 310 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 ASTN1O14525 1302 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 F8VZ95 297 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 WDR46O15213 610 aaKnown RBP11.3□□□□□ -0.6
CALD1-203ENST00000393118 THAP12O43422 761 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 SRGAP2CP0DJJ0 459 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 CXCL9Q07325 125 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 HGSNATQ68CP4 663 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 CEP120Q8N960 986 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 SLC20A1Q8WUM9 679 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 AKT1S1Q96B36 256 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 STMN4Q9H169 189 aaPredicted RBP11.3□□□□□ -0.6
CALD1-203ENST00000393118 USP20Q9Y2K6 914 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 DDX3XO00571 662 aaKnown RBP eCLIP11.3□□□□□ -0.6
CALD1-203ENST00000393118 ICAM1P05362 532 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 NR3C2P08235 984 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 ACOT2P49753 483 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 C2CD6Q53TS8 623 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 ZKSCAN4Q969J2 545 aaPredicted RBP11.3□□□□□ -0.6
CALD1-203ENST00000393118 SAMD15Q9P1V8 674 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 PASKQ96RG2 1323 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 MXRA7P84157 204 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 ZCWPW2Q504Y3 356 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 EGFL6Q8IUX8 553 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 NSUN6Q8TEA1 469 aaKnown RBP11.3□□□□□ -0.6
CALD1-203ENST00000393118 BTBD6Q96KE9 485 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 MPHOSPH6Q99547 160 aaKnown RBP11.3□□□□□ -0.6
CALD1-203ENST00000393118 FAM167BQ9BTA0 163 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 MKNK1Q9BUB5 465 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 GANQ9H2C0 597 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 TRPC6Q9Y210 931 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 ALG6Q9Y672 507 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 MYH8P13535 1937 aa11.3□□□□□ -0.6
CALD1-203ENST00000393118 PJA2O43164 708 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 SLC26A4O43511 780 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 ACSL3O95573 720 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 MAGOHP61326 146 aaKnown RBP11.29□□□□□ -0.6
CALD1-203ENST00000393118 JAG1P78504 1218 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 COBLL1Q53SF7 1204 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 MIS18BP1Q6P0N0 1132 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 SCARA5Q6ZMJ2 495 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 C1orf186Q6ZWK4 172 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 TSEN2Q8NCE0 465 aaKnown RBP11.29□□□□□ -0.6
CALD1-203ENST00000393118 TMEM143Q96AN5 459 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 C11orf70Q9BRQ4 267 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 ZNF408Q9H9D4 720 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 ACP6Q9NPH0 428 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 IRAK1P51617 712 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 TFAMQ00059 246 aaKnown RBP11.29□□□□□ -0.6
CALD1-203ENST00000393118 ARHGAP27Q6ZUM4 889 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 FBXL13Q8NEE6 735 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 IL31RAQ8NI17 732 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 DEFB129Q9H1M3 183 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 CSADQ9Y600 493 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 INO80B-WBP1J3KQ70 363 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 WNT10BO00744 389 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 PSMD10O75832 226 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 CNGA1P29973 690 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 KCNJ1P48048 391 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 RWDD2BP57060 319 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 TMEM270Q6UE05 265 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 CACNA2D3Q8IZS8 1091 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 C1orf54Q8WWF1 131 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 MSTO1Q9BUK6 570 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 INO80BQ9C086 356 aaPredicted RBP11.29□□□□□ -0.6
CALD1-203ENST00000393118 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
CALD1-203ENST00000393118 NXF1Q9UBU9 619 aaKnown RBP11.29□□□□□ -0.6
CALD1-203ENST00000393118 PARP2Q9UGN5 583 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 CNOT7Q9UIV1 285 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms