RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 LRRC63Q05C16 580 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 C16orf59Q7L2K0 433 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 PHOSPHO2Q8TCD6 241 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 LINC01599Q8WXQ3 324 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 NLRP4Q96MN2 994 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 GDF15Q99988 308 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 C9IYK1 514 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 SRGAP2CP0DJJ0 459 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 ARF4P18085 180 aaPredicted RBP14.56□□□□□ -0.08
USP44-202ENST00000393091 CYP2C18P33260 490 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 CACNB1Q02641 598 aaPredicted RBP14.56□□□□□ -0.08
USP44-202ENST00000393091 STRN3Q13033 797 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 DHX8Q14562 1220 aaKnown RBP14.56□□□□□ -0.08
USP44-202ENST00000393091 TCTN1Q2MV58 587 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 SLC27A1Q6PCB7 646 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 MPZL3Q6UWV2 235 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 C7orf61Q8IZ16 206 aa14.56□□□□□ -0.08
USP44-202ENST00000393091 NLRC5Q86WI3 1866 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 PRPF4BQ13523 1007 aaKnown RBP14.55□□□□□ -0.08
USP44-202ENST00000393091 ALKAL1Q6UXT8 129 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 OSBPL7Q9BZF2 842 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 KIAA0100Q14667 2235 aaKnown RBP14.55□□□□□ -0.08
USP44-202ENST00000393091 A0A0U1RQF3 1178 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 A0A1W2PPC1 479 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 RAG1P15918 1043 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 MARSP56192 900 aaKnown RBP14.55□□□□□ -0.08
USP44-202ENST00000393091 ZNF445P59923 1031 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 RTN4RL1Q86UN2 441 aaPredicted RBP14.55□□□□□ -0.08
USP44-202ENST00000393091 IFIH1Q9BYX4 1025 aaKnown RBP14.55□□□□□ -0.08
USP44-202ENST00000393091 RC3H2Q9HBD1 1191 aaKnown RBP14.55□□□□□ -0.08
USP44-202ENST00000393091 KIAA1586Q9HCI6 787 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 UBN1Q9NPG3 1134 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 DACH1Q9UI36 760 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 RWDD2AQ9UIY3 292 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 CCDC169A6NNP5 214 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 IDEP14735 1019 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 GRM5P41594 1212 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 PRKAG2Q9UGJ0 569 aa14.55□□□□□ -0.08
USP44-202ENST00000393091 TET1Q8NFU7 2136 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 CCNE1P24864 410 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 PRCPP42785 496 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 CLDN10P78369 228 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 NCBP1Q09161 790 aaKnown RBP14.54□□□□□ -0.08
USP44-202ENST00000393091 ATF7IP2Q5U623 682 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 MAEAQ7L5Y9 396 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 MKNK1Q9BUB5 465 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 GCNT3O95395 438 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 ADSSP30520 456 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 CD52P31358 61 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 RAD51AP2Q09MP3 1159 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 ZC2HC1CQ53FD0 456 aaPredicted RBP14.54□□□□□ -0.08
USP44-202ENST00000393091 TMEM240Q5SV17 173 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 HAPLN2Q9GZV7 340 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 DERAQ9Y315 318 aa14.54□□□□□ -0.08
USP44-202ENST00000393091 ENPP3O14638 875 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 MGEA5O60502 916 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 LDHAP00338 332 aaKnown RBP14.53□□□□□ -0.08
USP44-202ENST00000393091 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
USP44-202ENST00000393091 SLC24A5Q71RS6 500 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 GLIS3Q8NEA6 775 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 KIFC3Q9BVG8 833 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 GBP3Q9H0R5 595 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 SEMA6BQ9H3T3 888 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 PLEKHA5Q9HAU0 1116 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 SLC39A2Q9NP94 309 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 TNRC18O15417 2968 aaPredicted RBP14.53□□□□□ -0.08
USP44-202ENST00000393091 SLC16A3O15427 465 aaKnown RBP14.53□□□□□ -0.08
USP44-202ENST00000393091 ACTN1P12814 892 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 STX1AQ16623 288 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 TTI2Q6NXR4 508 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 CD302Q8IX05 232 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 BADQ92934 168 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 CEP63Q96MT8 703 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 AGPAT3Q9NRZ7 376 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 GDAQ9Y2T3 454 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.53□□□□□ -0.08
USP44-202ENST00000393091 BICDL2A1A5D9 508 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 CARNS1A5YM72 827 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 CALUO43852 315 aaPredicted RBP14.53□□□□□ -0.08
USP44-202ENST00000393091 ERLIN2O94905 339 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 GHRP10912 638 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 TMEM62Q0P6H9 643 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 CATSPER4Q7RTX7 472 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 NPAS4Q8IUM7 802 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 SMG8Q8ND04 991 aaKnown RBP14.53□□□□□ -0.08
USP44-202ENST00000393091 ZNF689Q96CS4 500 aaPredicted RBP14.53□□□□□ -0.08
USP44-202ENST00000393091 BORCS6Q96GS4 357 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 ANO10Q9NW15 660 aa14.53□□□□□ -0.08
USP44-202ENST00000393091 TTLL13PA6NNM8 815 aa14.52□□□□□ -0.08
USP44-202ENST00000393091 CHMP4BP1P59074 171 aa14.52□□□□□ -0.08
USP44-202ENST00000393091 STIM1Q13586 685 aa14.52□□□□□ -0.08
USP44-202ENST00000393091 IKBKEQ14164 716 aa14.52□□□□□ -0.08
USP44-202ENST00000393091 CAMK4Q16566 473 aa14.52□□□□□ -0.08
USP44-202ENST00000393091 ZSCAN23Q3MJ62 389 aa14.52□□□□□ -0.08
USP44-202ENST00000393091 TRMT1LQ7Z2T5 733 aaKnown RBP14.52□□□□□ -0.08
USP44-202ENST00000393091 NT5DC4Q86YG4 428 aa14.52□□□□□ -0.08
USP44-202ENST00000393091 SP7Q8TDD2 431 aaPredicted RBP14.52□□□□□ -0.08
USP44-202ENST00000393091 P2RX5Q93086 422 aa14.52□□□□□ -0.08
USP44-202ENST00000393091 RNF19AQ9NV58 838 aa14.52□□□□□ -0.08
USP44-202ENST00000393091 TMEM161AQ9NX61 479 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms