RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 USP38Q8NB14 1042 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 ATXN2LQ8WWM7 1075 aaKnown RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 MTBPQ96DY7 904 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 AGAP3Q96P47 875 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 MYLK2Q9H1R3 596 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 COPRSQ9NQ92 184 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 ARMCX3Q9UH62 379 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 PITPNM2Q9BZ72 1349 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 TMEM221A6NGB7 291 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 PCP4L1A6NKN8 68 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 RGL2O15211 777 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 GTPBP6O43824 516 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 CBX6O95503 412 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 EIF2S1P05198 315 aaKnown RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 POLR2EP19388 210 aaKnown RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 PPP1R2P41236 205 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 C21orf59P57076 290 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 PDE4DQ08499 809 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 AP1B1Q10567 949 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 ACAP1Q15027 740 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 PPP1R2P3Q6NXS1 205 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 EPM2AIP1Q7L775 607 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 PIGWQ7Z7B1 504 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 MAGEB6Q8N7X4 407 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 PAGE5Q96GU1 130 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 CNOT6LQ96LI5 555 aaKnown RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 LRGUKQ96M69 825 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 AIFM3Q96NN9 605 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 PLIN2Q99541 437 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 TRIM55Q9BYV6 548 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 GRIP2Q9C0E4 1043 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 RABGEF1Q9UJ41 708 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 ARHGAP23Q9P227 1491 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 MAP3K15Q6ZN16 1313 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 FAM196BA6NMK8 535 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 RPN1P04843 607 aaKnown RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 ALADP13716 330 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 PTPN12Q05209 780 aaKnown RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 GFPT1Q06210 699 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 TMED2Q15363 201 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 TMEM266Q2M3C6 531 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 SLC2A7Q6PXP3 512 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 FOXP4Q8IVH2 680 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 FITM2Q8N6M3 262 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 ZNF713Q8N859 430 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 ZBTB38Q8NAP3 1195 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 SNX27Q96L92 541 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 PABPC3Q9H361 631 aaKnown RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 UBN1Q9NPG3 1134 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 DDX28Q9NUL7 540 aaKnown RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 COQ6Q9Y2Z9 468 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 ATP6V0A2Q9Y487 856 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 RASA4BC9J798 803 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 ATP2A1O14983 1001 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 MAGEB3O15480 346 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 RASA4O43374 803 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 TPPPO94811 219 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 ERVK-9P63128 1117 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 IFI35P80217 286 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 PLCB3Q01970 1234 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 PDAP1Q13442 181 aaKnown RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 POLA2Q14181 598 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 CLUL1Q15846 466 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 OR52E8Q6IFG1 317 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 IYDQ6PHW0 289 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 NOP9Q86U38 636 aaKnown RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 ZSCAN29Q8IWY8 852 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 BBOF1Q8ND07 529 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 CAPSLQ8WWF8 208 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 SYMPKQ92797 1274 aaKnown RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 CCDC127Q96BQ5 260 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 DHTKD1Q96HY7 919 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 SMYD3Q9H7B4 428 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 BMP2KQ9NSY1 1161 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 TFCP2L1Q9NZI6 479 aa8.11□□□□□ -1.11
VTI1A-201ENST00000393077 RPL26L1Q9UNX3 145 aaKnown RBP8.11□□□□□ -1.11
VTI1A-201ENST00000393077 KIF28PB7ZC32 967 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 FGGP02679 453 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 KRT18P05783 430 aaKnown RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 CCDC159P0C7I6 412 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 PTPREP23469 700 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 HMOX2P30519 316 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 ARFIP2P53365 341 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 CTSWP56202 376 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 RHBDL3P58872 404 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 IKQ13123 557 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 NR1D2Q14995 579 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 HLFQ16534 295 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 KYNUQ16719 465 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 RTN1Q16799 776 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 PARP10Q53GL7 1025 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 PRR16Q569H4 304 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TJAP1Q5JTD0 557 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 PASD1Q8IV76 773 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 RFWD2Q8NHY2 731 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 KIAA1683Q9H0B3 1180 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 HSD3B7Q9H2F3 369 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 DENND2DQ9H6A0 471 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-201ENST00000393077 TAF6LQ9Y6J9 622 aa8.1□□□□□ -1.11
VTI1A-201ENST00000393077 SLC4A4Q9Y6R1 1079 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms