RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 DBR1Q9UK59 544 aaKnown RBP20.53■□□□□ 0.88
CCDC50-202ENST00000392456 COL4A3BPQ9Y5P4 624 aa20.53■□□□□ 0.88
CCDC50-202ENST00000392456 BICDL2A1A5D9 508 aa20.53■□□□□ 0.88
CCDC50-202ENST00000392456 FARP2O94887 1054 aaPredicted RBP20.53■□□□□ 0.88
CCDC50-202ENST00000392456 FAM13AO94988 1023 aa20.53■□□□□ 0.88
CCDC50-202ENST00000392456 ATP4AP20648 1035 aa20.53■□□□□ 0.88
CCDC50-202ENST00000392456 PAX3P23760 479 aa20.53■□□□□ 0.88
CCDC50-202ENST00000392456 EPM2AIP1Q7L775 607 aaPredicted RBP20.53■□□□□ 0.88
CCDC50-202ENST00000392456 GORASP1Q9BQQ3 440 aa20.53■□□□□ 0.88
CCDC50-202ENST00000392456 TSPYL2Q9H2G4 693 aaPredicted RBP20.53■□□□□ 0.88
CCDC50-202ENST00000392456 GNAT1P11488 350 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 COPB1P53618 953 aaKnown RBP20.52■□□□□ 0.88
CCDC50-202ENST00000392456 SOX10P56693 466 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 DBN1Q16643 649 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 ZNF792Q3KQV3 632 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 TOGARAM2Q6ZUX3 1019 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 GPR142Q7Z601 462 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 COPS5Q92905 334 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 THAP9Q9H5L6 903 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 SUN2Q9UH99 717 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 A6NHS1 94 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 GGPS1O95749 300 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 PSAPP07602 524 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 LRRC23Q53EV4 343 aaPredicted RBP20.52■□□□□ 0.88
CCDC50-202ENST00000392456 XKR9Q5GH70 373 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 LRRC55Q6ZSA7 311 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 RDM1Q8NG50 284 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 PARVGQ9HBI0 331 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 C15orf41Q9Y2V0 281 aa20.52■□□□□ 0.88
CCDC50-202ENST00000392456 WDR81Q562E7 1941 aa20.52■□□□□ 0.87
CCDC50-202ENST00000392456 GSTTP1A0A1W2PQM5 241 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 MGRN1O60291 552 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 SUPT20HL2P0C7V6 817 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 PPP1R2P41236 205 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 ZNF131P52739 623 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 SLMAPQ14BN4 828 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 NAA35Q5VZE5 725 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 PCYT2Q99447 389 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 HAUS2Q9NVX0 235 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 DOCK3Q8IZD9 2030 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 CTAGE15A4D2H0 777 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 FAM155AB1AL88 458 aaPredicted RBP20.51■□□□□ 0.87
CCDC50-202ENST00000392456 N4BP3O15049 544 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 STX10O60499 249 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 GCNT3O95395 438 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 CTAGE8P0CG41 777 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 MAGEA10P43363 369 aaPredicted RBP20.51■□□□□ 0.87
CCDC50-202ENST00000392456 FAM110CQ1W6H9 321 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 HSDL1Q3SXM5 330 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 ARMCX2Q7L311 632 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 CTAGE6Q86UF2 777 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 CTAGE4Q8IX94 777 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 GALNT15Q8N3T1 639 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 CNOT6LQ96LI5 555 aaKnown RBP20.51■□□□□ 0.87
CCDC50-202ENST00000392456 LRRC37A2A6NM11 1700 aa20.51■□□□□ 0.87
CCDC50-202ENST00000392456 ATG7O95352 703 aa20.5■□□□□ 0.87
CCDC50-202ENST00000392456 PBX1P40424 430 aa20.5■□□□□ 0.87
CCDC50-202ENST00000392456 MYO1EQ12965 1108 aa20.5■□□□□ 0.87
CCDC50-202ENST00000392456 TBX2Q13207 712 aaPredicted RBP20.5■□□□□ 0.87
CCDC50-202ENST00000392456 GRM1Q13255 1194 aa20.5■□□□□ 0.87
CCDC50-202ENST00000392456 ODR4Q5SWX8 454 aa20.5■□□□□ 0.87
CCDC50-202ENST00000392456 GJC2Q5T442 439 aaPredicted RBP20.5■□□□□ 0.87
CCDC50-202ENST00000392456 ACBD5Q5T8D3 534 aaPredicted RBP20.5■□□□□ 0.87
CCDC50-202ENST00000392456 C6orf89Q6UWU4 347 aa20.5■□□□□ 0.87
CCDC50-202ENST00000392456 MORC4Q8TE76 937 aa20.5■□□□□ 0.87
CCDC50-202ENST00000392456 STAMBPL1Q96FJ0 436 aa20.5■□□□□ 0.87
CCDC50-202ENST00000392456 TSC22D3Q99576 134 aa20.5■□□□□ 0.87
CCDC50-202ENST00000392456 OLFML3Q9NRN5 406 aa20.5■□□□□ 0.87
CCDC50-202ENST00000392456 PRKCEQ02156 737 aa20.5■□□□□ 0.87
CCDC50-202ENST00000392456 SFSWAPQ12872 951 aaKnown RBP20.5■□□□□ 0.87
CCDC50-202ENST00000392456 NOA1Q8NC60 698 aaKnown RBP20.5■□□□□ 0.87
CCDC50-202ENST00000392456 KCND2Q9NZV8 630 aa20.5■□□□□ 0.87
CCDC50-202ENST00000392456 B4DLN1 442 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 PDLIM1O00151 329 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 SLC10A3P09131 477 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 SCNN1BP51168 640 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 BRCA2P51587 3418 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 LRRC63Q05C16 580 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 CCDC62Q6P9F0 684 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 CCDC170Q8IYT3 715 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 TRIM4Q9C037 500 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 DNAAF2Q9NVR5 837 aaKnown RBP20.49■□□□□ 0.87
CCDC50-202ENST00000392456 TGFB3P10600 412 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 SPAG1Q07617 926 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 BLMHQ13867 455 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 TAF1CQ15572 869 aaPredicted RBP20.49■□□□□ 0.87
CCDC50-202ENST00000392456 ZNF720Q7Z2F6 126 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 ATP6V0A1Q93050 837 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 CEP170P1Q96L14 293 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 CTAGE1Q96RT6 745 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 TUBGCP2Q9BSJ2 902 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 ANKEF1Q9NU02 776 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 ABT1Q9ULW3 272 aaKnown RBP20.49■□□□□ 0.87
CCDC50-202ENST00000392456 TLL2Q9Y6L7 1015 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 IVNS1ABPQ9Y6Y0 642 aa20.49■□□□□ 0.87
CCDC50-202ENST00000392456 ADGRA2Q96PE1 1338 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 A0A1B0GVG6 124 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 MANSC4A6NHS7 340 aaPredicted RBP20.48■□□□□ 0.87
CCDC50-202ENST00000392456 BUB1BO60566 1050 aaPredicted RBP20.48■□□□□ 0.87
CCDC50-202ENST00000392456 GAP43P17677 238 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms