RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 ZNF280BQ86YH2 543 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 THNSL1Q8IYQ7 743 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 GSTCDQ8NEC7 633 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 KCNN1Q92952 543 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 IFT74Q96LB3 600 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 ZSCAN16Q9H4T2 348 aaPredicted RBP12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 C17orf75Q9HAS0 396 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 TLR9Q9NR96 1032 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 BLOC1S4Q9NUP1 217 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 MIOSQ9NXC5 875 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 KCND2Q9NZV8 630 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 ARHGAP28Q9P2N2 729 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 KANSL3Q9P2N6 904 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 FBXO2Q9UK22 296 aaPredicted RBP12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 GIT1Q9Y2X7 761 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 HES2Q9Y543 173 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 PCDHGC5Q9Y5F6 944 aa12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 SRPRBQ9Y5M8 271 aaKnown RBP12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 MTCL1Q9Y4B5 1905 aaKnown RBP12.58□□□□□ -0.4
IGHV4-28-201ENST00000390612 ARL5CA6NH57 179 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 EFEMP2O95967 443 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 PRKCBP05771 671 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 PLA2G4BP0C869 781 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 KCNA5P22460 613 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 GTF2F1P35269 517 aaKnown RBP eCLIP12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 UBA7P41226 1012 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 NPTX2P47972 431 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 SLC11A1P49279 550 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 ALDH7A1P49419 539 aaKnown RBP12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 DLX2Q07687 328 aaPredicted RBP12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 DSC1Q08554 894 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 KCNC3Q14003 757 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 USP49Q70CQ1 688 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 TAS1R3Q7RTX0 852 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 CDR2LQ86X02 465 aaPredicted RBP12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 EFHBQ8N7U6 833 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 DEPTORQ8TB45 409 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 BCL7CQ8WUZ0 217 aaPredicted RBP12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 SPIRE2Q8WWL2 714 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 IGSF21Q96ID5 467 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 DRC1Q96MC2 740 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 USP28Q96RU2 1077 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 GAD1Q99259 594 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 KIFC3Q9BVG8 833 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 NXF3Q9H4D5 531 aaKnown RBP12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 PDZD7Q9H5P4 517 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 TMEM134Q9H6X4 195 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 DNAJB4Q9UDY4 337 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 PUF60Q9UHX1 559 aaKnown RBP12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 INPP5FQ9Y2H2 1132 aa12.57□□□□□ -0.4
IGHV4-28-201ENST00000390612 GRXCR2A6NFK2 248 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 NT5C1B-RDH14C9J2C7 533 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 N4BP3O15049 544 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 NPTXRO95502 500 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 GLP2RO95838 553 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 PDIA4P13667 645 aaKnown RBP12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 NASPP49321 788 aaPredicted RBP12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 PEX3P56589 373 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 KRT17Q04695 432 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 PRPF4BQ13523 1007 aaKnown RBP12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 SLC39A14Q15043 492 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 DUSP6Q16828 381 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 EEF1DP3Q658K8 133 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 COLGALT2Q8IYK4 626 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 URGCPQ8TCY9 931 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 ADAMTS19Q8TE59 1207 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 MSLNLQ96KJ4 702 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 ZFP42Q96MM3 310 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 PLIN2Q99541 437 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 TMEM175Q9BSA9 504 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 VN1R3Q9BXE9 311 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 PTPRHQ9HD43 1115 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 NGRNQ9NPE2 291 aaKnown RBP12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 USP20Q9Y2K6 914 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 RBM19Q9Y4C8 960 aaKnown RBP12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 MYO10Q9HD67 2058 aa12.56□□□□□ -0.4
IGHV4-28-201ENST00000390612 VWA8A3KMH1 1905 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 SFI1A8K8P3 1242 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 K7ERI5 159 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 ABLIM1O14639 778 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 LINC01565O15544 149 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 ZC3H11AO75152 810 aaKnown RBP eCLIP12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 TBX10O75333 385 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 POMCP01189 267 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 PLS3P13797 630 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 PLCG1P19174 1290 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 MARCKSP29966 332 aaPredicted RBP12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 ZNF131P52739 623 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 KARSQ15046 597 aaKnown RBP12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 ZRSR1Q15695 479 aaKnown RBP12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 TMEM184AQ6ZMB5 413 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 DDX53Q86TM3 631 aaKnown RBP12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 HSCBQ8IWL3 235 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 MRPL43Q8N983 215 aaKnown RBP12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 TMEM161BQ8NDZ6 487 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 PPP2R3CQ969Q6 453 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 CALML4Q96GE6 196 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 EPSTI1Q96J88 318 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms