RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 MAP9Q49MG5 647 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 DNAJC21Q5F1R6 531 aaKnown RBP8.27□□□□□ -1.09
TRBV28-201ENST00000390400 CCDC174Q6PII3 467 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 LBX2Q6XYB7 198 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 C1orf229Q6ZS94 237 aaPredicted RBP8.27□□□□□ -1.09
TRBV28-201ENST00000390400 HEATR3Q7Z4Q2 680 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 LSRQ86X29 649 aaPredicted RBP8.27□□□□□ -1.09
TRBV28-201ENST00000390400 SMARCC2Q8TAQ2 1214 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 SMCR8Q8TEV9 937 aaPredicted RBP8.27□□□□□ -1.09
TRBV28-201ENST00000390400 SMARCE1Q969G3 411 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 P2RX7Q99572 595 aaKnown RBP8.27□□□□□ -1.09
TRBV28-201ENST00000390400 NAA15Q9BXJ9 866 aaKnown RBP8.27□□□□□ -1.09
TRBV28-201ENST00000390400 RANBP17Q9H2T7 1088 aaKnown RBP8.27□□□□□ -1.09
TRBV28-201ENST00000390400 SLC38A10Q9HBR0 1119 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 PNMA2Q9UL42 364 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 ADAMTS5Q9UNA0 930 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 A0A0G2JMZ2 1700 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 THSD7BQ9C0I4 1608 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 VPS37CA5D8V6 355 aaPredicted RBP8.26□□□□□ -1.09
TRBV28-201ENST00000390400 hCG_1984214I3L0E3 225 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 DTNBO60941 627 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 ICAM1P05362 532 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 ARAFP10398 606 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 CYP2C8P10632 490 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 XBP1P17861 261 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 MX2P20592 715 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 GCLCP48506 637 aaPredicted RBP8.26□□□□□ -1.09
TRBV28-201ENST00000390400 AARSP49588 968 aaKnown RBP eCLIP8.26□□□□□ -1.09
TRBV28-201ENST00000390400 OAZ1P54368 228 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 SATB1Q01826 763 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 IKBKEQ14164 716 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 INPP5AQ14642 412 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 PLS1Q14651 629 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 PKN1Q16512 942 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 PFKFB3Q16875 520 aaPredicted RBP8.26□□□□□ -1.09
TRBV28-201ENST00000390400 FBXW10Q5XX13 1052 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 C20orf204Q6ZNR8 217 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 TADA2BQ86TJ2 420 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 TAX1BP1Q86VP1 789 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 FBXO11Q86XK2 927 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 REXO1L1PQ8IX06 675 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 DHX40Q8IX18 779 aaKnown RBP8.26□□□□□ -1.09
TRBV28-201ENST00000390400 CPXCR1Q8N123 301 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 MICALL1Q8N3F8 863 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 ZNF713Q8N859 430 aaPredicted RBP8.26□□□□□ -1.09
TRBV28-201ENST00000390400 RPGRIP1Q96KN7 1286 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 FERD3LQ96RJ6 166 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 ALG1Q9BT22 464 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 AMNQ9BXJ7 453 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 TEX13BQ9BXU2 312 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 AVENQ9NQS1 362 aaPredicted RBP8.26□□□□□ -1.09
TRBV28-201ENST00000390400 NRBP1Q9UHY1 535 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 CCPG1Q9ULG6 757 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 RABGAP1Q9Y3P9 1069 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 PCDHB14Q9Y5E9 798 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 PCDHA1Q9Y5I3 950 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 MRFAP1Q9Y605 127 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 MYH15Q9Y2K3 1946 aa8.26□□□□□ -1.09
TRBV28-201ENST00000390400 EIF3CLB5ME19 914 aaKnown RBP8.25□□□□□ -1.09
TRBV28-201ENST00000390400 GFRA2O00451 464 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 PPP1R11O60927 126 aaPredicted RBP8.25□□□□□ -1.09
TRBV28-201ENST00000390400 YEATS4O95619 227 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 FDPSP14324 419 aaKnown RBP8.25□□□□□ -1.09
TRBV28-201ENST00000390400 COPB2P35606 906 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 STAT3P40763 770 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 RESTQ13127 1097 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 TRIM29Q14134 588 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 TMEM132BQ14DG7 1078 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 PCSK7Q16549 785 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 USH1GQ495M9 461 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 RNFT1Q5M7Z0 435 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 WWC2Q6AWC2 1192 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 SNRNP48Q6IEG0 339 aaKnown RBP8.25□□□□□ -1.09
TRBV28-201ENST00000390400 FOXR1Q6PIV2 292 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 TRIM65Q6PJ69 517 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 C8orf86Q6ZUL3 223 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 C10orf67Q8IYJ2 551 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 REXO1Q8N1G1 1221 aaKnown RBP8.25□□□□□ -1.09
TRBV28-201ENST00000390400 ANKRD13CQ8N6S4 541 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 ANKRD20A12PQ8NF67 263 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 REPS2Q8NFH8 660 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 ENGASEQ8NFI3 743 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 GPRC5AQ8NFJ5 357 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 CCDC148Q8NFR7 591 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 KCNG4Q8TDN1 519 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 GPBAR1Q8TDU6 330 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 CCDC12Q8WUD4 166 aaPredicted RBP8.25□□□□□ -1.09
TRBV28-201ENST00000390400 TTC9Q92623 222 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 C8orf76Q96K31 380 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 AIFM3Q96NN9 605 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 EIF3CQ99613 913 aaKnown RBP8.25□□□□□ -1.09
TRBV28-201ENST00000390400 PAGR1Q9BTK6 254 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 TRIM55Q9BYV6 548 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 EHMT1Q9H9B1 1298 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 RAVER2Q9HCJ3 691 aaKnown RBP8.25□□□□□ -1.09
TRBV28-201ENST00000390400 SH3GLB2Q9NR46 395 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 BARHL2Q9NY43 387 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 FRRS1LQ9P0K9 344 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 GGA2Q9UJY4 613 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 CORINQ9Y5Q5 1042 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms