RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 KLF18A0A0U1RQI7 1052 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 DDX11L8A8MPP1 907 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 TGM5O43548 720 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 GAS2O43903 313 aaKnown RBP13.25□□□□□ -0.29
SOD1-202ENST00000389995 GLUD2P49448 558 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 DNM2P50570 870 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 RAB27AP51159 221 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 NTHL1P78549 312 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 NECTIN1Q15223 517 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 LRCH2Q5VUJ6 765 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 TSSK4Q6SA08 328 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 PARM1Q6UWI2 310 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 MRPL10Q7Z7H8 261 aaKnown RBP13.25□□□□□ -0.29
SOD1-202ENST00000389995 TEX2Q8IWB9 1127 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 CCDC136Q96JN2 1154 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 NIFKQ9BYG3 293 aaKnown RBP13.25□□□□□ -0.29
SOD1-202ENST00000389995 ZMYND12Q9H0C1 365 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 IFT122Q9HBG6 1241 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 SLC2A4RGQ9NR83 387 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
SOD1-202ENST00000389995 AGPAT5Q9NUQ2 364 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 MIOSQ9NXC5 875 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 F5P12259 2224 aa13.25□□□□□ -0.29
SOD1-202ENST00000389995 CARNS1A5YM72 827 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 CIITAP33076 1130 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 STARD6P59095 220 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 UBXN2BQ14CS0 331 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 MIER3Q7Z3K6 550 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 ZNF410Q86VK4 478 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 COLGALT2Q8IYK4 626 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
SOD1-202ENST00000389995 SLC5A5Q92911 643 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 NXPE3Q969Y0 559 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 TEKT3Q9BXF9 490 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 INO80BQ9C086 356 aaPredicted RBP13.24□□□□□ -0.29
SOD1-202ENST00000389995 RXFP1Q9HBX9 757 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 C6orf50Q9HD87 102 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.24□□□□□ -0.29
SOD1-202ENST00000389995 CACNG4Q9UBN1 327 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 HES2Q9Y543 173 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 LAMA1P25391 3075 aa13.24□□□□□ -0.29
SOD1-202ENST00000389995 KANSL1LA0AUZ9 987 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 TULP1O00294 542 aaPredicted RBP13.23□□□□□ -0.29
SOD1-202ENST00000389995 LAMTOR5O43504 91 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 MAFO75444 373 aaPredicted RBP13.23□□□□□ -0.29
SOD1-202ENST00000389995 EFEMP2O95967 443 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 SRGAP2CP0DJJ0 459 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 FSHRP23945 695 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 HOXA11P31270 313 aaPredicted RBP13.23□□□□□ -0.29
SOD1-202ENST00000389995 MLH1P40692 756 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 JAK3P52333 1124 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 NPEPPSP55786 919 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 EXOSC10Q01780 885 aaKnown RBP13.23□□□□□ -0.29
SOD1-202ENST00000389995 ADCK5Q3MIX3 580 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 XKR3Q5GH77 459 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 GRASPQ7Z6J2 395 aaPredicted RBP13.23□□□□□ -0.29
SOD1-202ENST00000389995 RNF168Q8IYW5 571 aaPredicted RBP13.23□□□□□ -0.29
SOD1-202ENST00000389995 SMG8Q8ND04 991 aaKnown RBP13.23□□□□□ -0.29
SOD1-202ENST00000389995 RSPH1Q8WYR4 309 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 PHKBQ93100 1093 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 ZFP42Q96MM3 310 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 GAD1Q99259 594 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 APOL6Q9BWW8 343 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 EIF2AQ9BY44 585 aaKnown RBP13.23□□□□□ -0.29
SOD1-202ENST00000389995 GPR62Q9BZJ7 368 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 PRKD2Q9BZL6 878 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 ANO2Q9NQ90 1003 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 KANSL3Q9P2N6 904 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 RALYQ9UKM9 306 aaKnown RBP13.23□□□□□ -0.29
SOD1-202ENST00000389995 TICRRQ7Z2Z1 1910 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 PDCD11Q14690 1871 aaKnown RBP13.23□□□□□ -0.29
SOD1-202ENST00000389995 CEP295Q9C0D2 2601 aa13.23□□□□□ -0.29
SOD1-202ENST00000389995 ESYT2A0FGR8 921 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 ARL5CA6NH57 179 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 FAM170BA6NMN3 283 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 PSMD10O75832 226 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 ITGA4P13612 1032 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 CPA1P15085 419 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 SFNP31947 248 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 SCNN1GP51170 649 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 CDC42EP1Q00587 391 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 DSG1Q02413 1049 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 MLF2Q15773 248 aaPredicted RBP13.22□□□□□ -0.29
SOD1-202ENST00000389995 ST3GAL2Q16842 350 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 ELMSAN1Q6PJG2 1045 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 PRSS55Q6UWB4 352 aaPredicted RBP13.22□□□□□ -0.29
SOD1-202ENST00000389995 CYP26C1Q6V0L0 522 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 ANO5Q75V66 913 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 ATRIPQ8WXE1 791 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 TMEM143Q96AN5 459 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 RIT2Q99578 217 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 KXD1Q9BQD3 176 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 BCO2Q9BYV7 579 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 PARD6AQ9NPB6 346 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 STK39Q9UEW8 545 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 DPP7Q9UHL4 492 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 CDV3Q9UKY7 258 aaKnown RBP13.22□□□□□ -0.29
SOD1-202ENST00000389995 USP18Q9UMW8 372 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms