RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 IGSF9BQ9UPX0 1349 aa10.96□□□□□ -0.65
PKP4-201ENST00000389757 CREB3O43889 395 aa10.96□□□□□ -0.65
PKP4-201ENST00000389757 GAS2O43903 313 aaKnown RBP10.96□□□□□ -0.65
PKP4-201ENST00000389757 DACT2Q5SW24 774 aa10.96□□□□□ -0.65
PKP4-201ENST00000389757 METTL16Q86W50 562 aaKnown RBP10.96□□□□□ -0.65
PKP4-201ENST00000389757 ZNF564Q8TBZ8 553 aaPredicted RBP10.96□□□□□ -0.65
PKP4-201ENST00000389757 ARHGEF2Q92974 986 aaKnown RBP10.96□□□□□ -0.65
PKP4-201ENST00000389757 IL18RAPO95256 599 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 MOCS2O96007 188 aaPredicted RBP10.96□□□□□ -0.66
PKP4-201ENST00000389757 FGGP02679 453 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 PGK2P07205 417 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 GRIK1P39086 918 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 FKBP1AP62942 108 aaKnown RBP10.96□□□□□ -0.66
PKP4-201ENST00000389757 C2orf54Q08AI8 447 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 CC2D1AQ6P1N0 951 aaPredicted RBP10.96□□□□□ -0.66
PKP4-201ENST00000389757 USP50Q70EL3 339 aaPredicted RBP10.96□□□□□ -0.66
PKP4-201ENST00000389757 TTC25Q96NG3 672 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 NUP85Q9BW27 656 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 SYNGAP1Q96PV0 1343 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 RICTORQ6R327 1708 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 KRT7P08729 469 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 EPHB4P54760 987 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 ATP11AP98196 1134 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 SF3A3Q12874 501 aaKnown RBP eCLIP10.96□□□□□ -0.667e-7■■■■□ 21.2
PKP4-201ENST00000389757 IQCB1Q15051 598 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 STILQ15468 1287 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 SNRNP35Q16560 246 aaKnown RBP10.96□□□□□ -0.66
PKP4-201ENST00000389757 KIAA1755Q5JYT7 1200 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 TTC30AQ86WT1 665 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 ARRDC4Q8NCT1 418 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 HPS3Q969F9 1004 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 POLR3CQ9BUI4 534 aaPredicted RBP10.96□□□□□ -0.66
PKP4-201ENST00000389757 TMEM60Q9H2L4 133 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 ATP8A1Q9Y2Q0 1164 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 MYMKA6NI61 221 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 FTLP02792 175 aaPredicted RBP10.96□□□□□ -0.66
PKP4-201ENST00000389757 SOX5P35711 763 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 ASPHQ12797 758 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 NME3Q13232 169 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 SLMAPQ14BN4 828 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 NOTUMQ6P988 496 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 TADA2BQ86TJ2 420 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 YAF2Q8IY57 180 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 KLHL14Q9P2G3 628 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 PCSK1NQ9UHG2 260 aa10.96□□□□□ -0.66
PKP4-201ENST00000389757 MSH4O15457 936 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 PALMO75781 387 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 FDPSP14324 419 aaKnown RBP10.95□□□□□ -0.66
PKP4-201ENST00000389757 SCP2P22307 547 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 CDK17Q00537 523 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 GFPT1Q06210 699 aaPredicted RBP10.95□□□□□ -0.66
PKP4-201ENST00000389757 SGSM1Q2NKQ1 1148 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 ADGRA1Q86SQ6 560 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 AP1M1Q9BXS5 423 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 KIAA1683Q9H0B3 1180 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 HPS5Q9UPZ3 1129 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 FARP1Q9Y4F1 1045 aaPredicted RBP10.95□□□□□ -0.66
PKP4-201ENST00000389757 HEY1Q9Y5J3 304 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 PDHXO00330 501 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 GPC4O75487 556 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 NPEPPSP55786 919 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 NCOA4Q13772 614 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 FAF2Q96CS3 445 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 A0A1W2PQC6 194 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 DCDC2CA8MYV0 355 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 ADM5C9JUS6 153 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 CCDC188H7C350 402 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 NEMP1O14524 444 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 RHOBTB3O94955 611 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 NLRP11P59045 1033 aaKnown RBP10.95□□□□□ -0.66
PKP4-201ENST00000389757 PSMD6Q15008 389 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 CENPUQ71F23 418 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 PCSK9Q8NBP7 692 aaKnown RBP10.95□□□□□ -0.66
PKP4-201ENST00000389757 LRRC8CQ8TDW0 803 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 DHX38Q92620 1227 aaKnown RBP10.95□□□□□ -0.66
PKP4-201ENST00000389757 KIF2CQ99661 725 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 EDEM3Q9BZQ6 932 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 ZDHHC9Q9Y397 364 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 PCGF5Q86SE9 256 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 HVCN1Q96D96 273 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 IL25Q9H293 177 aa10.95□□□□□ -0.66
PKP4-201ENST00000389757 COL3A1P02461 1466 aaPredicted RBP10.94□□□□□ -0.66
PKP4-201ENST00000389757 LCP1P13796 627 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 THPOP40225 353 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 SNRPFP62306 86 aaKnown RBP10.94□□□□□ -0.66
PKP4-201ENST00000389757 HERVK_113P62684 666 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 TAP1Q03518 808 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 DDX50Q9BQ39 737 aaKnown RBP10.94□□□□□ -0.66
PKP4-201ENST00000389757 FSD1LQ9BXM9 530 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 SPATC1LQ9H0A9 340 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 UNC45AQ9H3U1 944 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 BCL2L12Q9HB09 334 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 MAP2P11137 1827 aaKnown RBP10.94□□□□□ -0.66
PKP4-201ENST00000389757 PITPNM2Q9BZ72 1349 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 MYBP10242 640 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 DHX9Q08211 1270 aaKnown RBP10.94□□□□□ -0.66
PKP4-201ENST00000389757 ZNF484Q5JVG2 852 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 NUDT18Q6ZVK8 323 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 ADSSL1Q8N142 457 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 IFT43Q96FT9 208 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms