RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 DCHS2Q6V1P9 2916 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 TNFRSF10BO14763 440 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 CYP7B1O75881 506 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 LRIG2O94898 1065 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 MYCP01106 439 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PDE6AP16499 860 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 LIG1P18858 919 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PTGS1P23219 599 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 KCNJ5P48544 419 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ENTPD1P49961 510 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SOX10P56693 466 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 MRPS5P82675 430 aaKnown RBP-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SCAPQ12770 1279 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 KIF4BQ2VIQ3 1234 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 C11orf91Q3C1V1 193 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 NAIF1Q69YI7 327 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ARMCX6Q7L4S7 300 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 WAPLQ7Z5K2 1190 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SMIM29Q86T20 159 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PIM3Q86V86 326 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 UNC5BQ8IZJ1 945 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 NKAPQ8N5F7 415 aaKnown RBP-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 RFLNBQ8N5W9 214 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PRSS3P2Q8NHM4 247 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 U2AF1L4Q8WU68 220 aaKnown RBP-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ZNRF4Q8WWF5 429 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 BSNDQ8WZ55 320 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 MIB2Q96AX9 1013 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 FBXO17Q96EF6 278 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 HEPHQ9BQS7 1158 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 TRIM15Q9C019 465 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 CCSER1Q9C0I3 900 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 C6orf106Q9H6K1 298 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PTPRHQ9HD43 1115 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 RPH3ALQ9UNE2 315 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 WNT6Q9Y6F9 365 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 FPGT-TNNI3KV9GXZ4 949 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 BSNQ9UPA5 3926 aa-1.61□□□□□ -2.67
RNU6-1340P-201ENST00000384438 RBM47A0AV96 593 aaKnown RBP-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SERTM1A2A2V5 107 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 TESPA1A2RU30 521 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 MOXD2PA6NHM9 499 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 B9A039 149 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 GFRA2O00451 464 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 CBFA2T2O43439 604 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ZNF862O60290 1169 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 XYLBO75191 536 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 CKMP06732 381 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SLFN14P0C7P3 912 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 CYP2D6P10635 497 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 CD34P28906 385 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SHC1P29353 583 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ALDH4A1P30038 563 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ARRB2P32121 409 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PMELP40967 661 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ID4P47928 161 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 LIG4P49917 911 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 HUNKP57058 714 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 LYZP61626 148 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ADARB1P78563 741 aaKnown RBP-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 NDPQ00604 133 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 TRIM26Q12899 539 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 GRIK2Q13002 908 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 USP10Q14694 798 aaKnown RBP-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 IZUMO4Q1ZYL8 232 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PGS1Q32NB8 556 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 TPRNQ4KMQ1 711 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 C10orf25Q5T742 122 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 NAPEPLDQ6IQ20 393 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ANO7Q6IWH7 933 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 FBXL19Q6PCT2 694 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PI16Q6UXB8 463 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ZPBP2Q6X784 338 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 LIN28BQ6ZN17 250 aaKnown RBP eCLIP-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 Q6ZNX1 250 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 MIB1Q86YT6 1006 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 LMNTD2Q8IXW0 634 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 GALNT16Q8N428 558 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 USHBP1Q8N6Y0 703 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 Q8NDZ9 215 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 FGFBP3Q8TAT2 258 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 CPT1CQ8TCG5 803 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SORCS1Q8WY21 1168 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SMARCD2Q92925 531 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SLC46A1Q96NT5 459 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PKP4Q99569 1192 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SLC46A2Q9BY10 475 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 BARHL1Q9BZE3 327 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 FOXP3Q9BZS1 431 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 C12orf65Q9H3J6 166 aaKnown RBP-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PDLIM7Q9NR12 457 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 TLR8Q9NR97 1041 aaKnown RBP-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ZNF232Q9UNY5 417 aa-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 GPR55Q9Y2T6 319 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 USP9XQ93008 2570 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-1340P-201ENST00000384438 NACAE9PAV3 2078 aa-1.63□□□□□ -2.67
RNU6-1340P-201ENST00000384438 MED13Q9UHV7 2174 aa-1.63□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ZNF840PA6NDX5 716 aa-1.63□□□□□ -2.67
RNU6-1340P-201ENST00000384438 GOLGA6L6A8MZA4 724 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms