RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 RBM12Q9NTZ6 932 aaKnown RBP4.42□□□□□ -1.7
RNU6-39P-201ENST00000384344 ING3Q9NXR8 418 aa4.42□□□□□ -1.7
RNU6-39P-201ENST00000384344 DDX56Q9NY93 547 aaKnown RBP4.42□□□□□ -1.7
RNU6-39P-201ENST00000384344 FAM171A2A8MVW0 826 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 GABRDO14764 452 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 FOXS1O43638 330 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 MFAP3LO75121 409 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 IPO13O94829 963 aaKnown RBP4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 ENDOD1O94919 500 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 SNUPNO95149 360 aaKnown RBP4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 GNAT2P19087 354 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 CTSSP25774 331 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 CRHR1P34998 444 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 PER3P56645 1201 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 INAVAQ3KP66 663 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 FKBP15Q5T1M5 1219 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 SGMS1Q86VZ5 419 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 RPUSD2Q8IZ73 545 aaKnown RBP4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 CBARPQ8N350 705 aaPredicted RBP4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 RIN2Q8WYP3 895 aaPredicted RBP4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 DVL3Q92997 716 aaPredicted RBP4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 CHMP4CQ96CF2 233 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 IL17RAQ96F46 866 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 ASPSCR1Q9BZE9 553 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 SLC13A1Q9BZW2 595 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 ZNF277Q9NRM2 450 aaPredicted RBP4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 DNM3Q9UQ16 869 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 HDAC5Q9UQL6 1122 aa4.41□□□□□ -1.7
RNU6-39P-201ENST00000384344 CAPN14A8MX76 684 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 PDGFRBP09619 1106 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 MAGEA10P43363 369 aaPredicted RBP4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 GZMKP49863 264 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 SAFB2Q14151 953 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 ACAP1Q15027 740 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 PRKD1Q15139 912 aaPredicted RBP4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 MIGA2Q7L4E1 593 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 PRRT2Q7Z6L0 340 aaPredicted RBP4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 GSPT2Q8IYD1 628 aaKnown RBP4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 DNERQ8NFT8 737 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 BORCS6Q96GS4 357 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 C8orf49Q96NF6 230 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 SSBP3Q9BWW4 388 aaPredicted RBP4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 KLC2Q9H0B6 622 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 GPRC5DQ9NZD1 345 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 ST6GALNAC2Q9UJ37 374 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 CLCA2Q9UQC9 943 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 PCDHGA2Q9Y5H1 932 aa4.4□□□□□ -1.71
RNU6-39P-201ENST00000384344 B8ZZF3 427 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 MUSKO15146 869 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 TMEM127O75204 238 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 ITGA10O75578 1167 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 RPLP2P05387 115 aaKnown RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 CT47B1P0C2W7 299 aaPredicted RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 HSP90B1P14625 803 aaKnown RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 GSPT1P15170 499 aaKnown RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 ACO1P21399 889 aaKnown RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 ADSLP30566 484 aaPredicted RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 CASRP41180 1078 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 MCAMP43121 646 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 RECQLP46063 649 aaPredicted RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 ADAM8P78325 824 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 EFEMP1Q12805 493 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 FOXL1Q12952 345 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 DUSP8Q13202 625 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 CRHR2Q13324 411 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 ICAM4Q14773 271 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 NOMO1Q15155 1222 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 ELAVL1Q15717 326 aaKnown RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 MST1LQ2TV78 715 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 ZNF585AQ6P3V2 769 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 ABHD15Q6UXT9 468 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 APBB1IPQ7Z5R6 666 aaPredicted RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 THEMISQ8N1K5 641 aaPredicted RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 MIER2Q8N344 545 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 MSL3Q8N5Y2 521 aaKnown RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 PPM1NQ8N819 430 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 OR7D4Q8NG98 312 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 Q8TCH9 128 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 MIEF2Q96C03 454 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 ZNF512Q96ME7 567 aaPredicted RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 ADOQ96SZ5 270 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 C7orf25Q9BPX7 421 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 MANSC1Q9H8J5 431 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 AGO3Q9H9G7 860 aaKnown RBP4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 BCO1Q9HAY6 547 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 AASDHPPTQ9NRN7 309 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 LANCL2Q9NS86 450 aa4.39□□□□□ -1.71
RNU6-39P-201ENST00000384344 PPM1GO15355 546 aaPredicted RBP4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 TEX33O43247 280 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 DTNBO60941 627 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 NDUFS2O75306 463 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 S100BP04271 92 aaPredicted RBP4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 VCAM1P19320 739 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 HIBADHP31937 336 aaKnown RBP4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 PTPN7P35236 360 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 NEK2P51955 445 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 APBA1Q02410 837 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 PTH1RQ03431 593 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 MGAT2Q10469 447 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms