RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 GPC5P78333 572 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 ZWILCHQ9H900 591 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 L3MBTL1Q9Y468 752 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 GPR75-ASB3A0A0A6YYF3 556 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 H3BRJ5 948 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 PLSCR1O15162 318 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 SYF2O95926 243 aaKnown RBP14.87□□□□□ -0.03
SNPH-201ENST00000381867 EPHB1P54762 984 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 C16orf86Q6ZW13 317 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 TRIM59Q8IWR1 403 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 BTBD6Q96KE9 485 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 ZNF70Q9UC06 446 aaPredicted RBP14.87□□□□□ -0.03
SNPH-201ENST00000381867 CNOT8Q9UFF9 292 aaKnown RBP14.87□□□□□ -0.03
SNPH-201ENST00000381867 DCTN4Q9UJW0 460 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 TRIM49BA6NDI0 452 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 ZRANB2O95218 330 aaKnown RBP eCLIP14.87□□□□□ -0.03
SNPH-201ENST00000381867 GNAT1P11488 350 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 CD58P19256 250 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 ERICH1Q86X53 443 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 DHX40Q8IX18 779 aaKnown RBP14.87□□□□□ -0.03
SNPH-201ENST00000381867 MLXIPLQ9NP71 852 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 DPEP1P16444 411 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 USP11P51784 963 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 RYBPQ8N488 228 aaPredicted RBP14.86□□□□□ -0.03
SNPH-201ENST00000381867 MCPH1Q8NEM0 835 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 DTNBP1Q96EV8 351 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 NCK2O43639 380 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 NOP14P78316 857 aaKnown RBP14.86□□□□□ -0.03
SNPH-201ENST00000381867 UBE2SQ16763 222 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 RNF146Q9NTX7 359 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 ARHGEF9O43307 516 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 E2F6O75461 281 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 HDAC4P56524 1084 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 SNRNP48Q6IEG0 339 aaKnown RBP14.86□□□□□ -0.03
SNPH-201ENST00000381867 GFM2Q969S9 779 aaKnown RBP14.86□□□□□ -0.03
SNPH-201ENST00000381867 PPP1R16BQ96T49 567 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 KIF9Q9HAQ2 790 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 HDAC6Q9UBN7 1215 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 NEK2P51955 445 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 SLFN12LQ6IEE8 588 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 CLEC17AQ6ZS10 378 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 COL23A1Q86Y22 540 aaPredicted RBP14.86□□□□□ -0.03
SNPH-201ENST00000381867 HSPH1Q92598 858 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 NCLNQ969V3 563 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 VIPAS39Q9H9C1 493 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 BATF3Q9NR55 127 aa14.86□□□□□ -0.03
SNPH-201ENST00000381867 ZFXP17010 805 aaPredicted RBP14.85□□□□□ -0.03
SNPH-201ENST00000381867 PRELPP51888 382 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 MTERF2Q49AM1 385 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 RMDN3Q96TC7 470 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 DDX47Q9H0S4 455 aaKnown RBP14.85□□□□□ -0.03
SNPH-201ENST00000381867 LRRC4Q9HBW1 653 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 IRX1P78414 480 aaPredicted RBP14.85□□□□□ -0.03
SNPH-201ENST00000381867 CCDC92Q53HC0 331 aaPredicted RBP14.85□□□□□ -0.03
SNPH-201ENST00000381867 PPP1R37O75864 691 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 KITP10721 976 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 EIF2AK2P19525 551 aaKnown RBP14.85□□□□□ -0.03
SNPH-201ENST00000381867 KCNA4P22459 653 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 COPS2P61201 443 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 EXOSC10Q01780 885 aaKnown RBP14.85□□□□□ -0.03
SNPH-201ENST00000381867 PDXDC2PQ6P474 469 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 SLC12A6Q9UHW9 1150 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 MYO5BQ9ULV0 1848 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 RNF103-CHMP3A0A140T963 221 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 ASB14A6NK59 587 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 SPP2Q13103 211 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 MORF4L2Q15014 288 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 EPN3Q9H201 632 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 MTMR4Q9NYA4 1195 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 ADAM22Q9P0K1 906 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 FBXL5Q9UKA1 691 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 FMN2Q9NZ56 1722 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 GUCY1A3Q02108 690 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 TFDP2Q14188 446 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 CDC42EP5Q6NZY7 148 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 ZBED2Q9BTP6 218 aa14.85□□□□□ -0.03
SNPH-201ENST00000381867 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
SNPH-201ENST00000381867 HNRNPCL1O60812 293 aaKnown RBP14.84□□□□□ -0.03
SNPH-201ENST00000381867 CCDC22O60826 627 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 DNAJC6O75061 913 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 SLC4A1P02730 911 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 HNRNPCP07910 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
SNPH-201ENST00000381867 AKR1B1P15121 316 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 PAMP19021 973 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 PRCPP42785 496 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 VSNL1P62760 191 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 MTMR1Q13613 665 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 RARS2Q5T160 578 aaKnown RBP14.84□□□□□ -0.03
SNPH-201ENST00000381867 EIF4E1BA6NMX2 242 aaKnown RBP14.84□□□□□ -0.03
SNPH-201ENST00000381867 SOX5P35711 763 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 SIX6OS1Q8N1H7 587 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 HEMGNQ9BXL5 484 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 CPSF3Q9UKF6 684 aaKnown RBP14.84□□□□□ -0.03
SNPH-201ENST00000381867 TRAF3IP3Q9Y228 551 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 ATP1A1P05023 1023 aaKnown RBP14.84□□□□□ -0.03
SNPH-201ENST00000381867 PMLP29590 882 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 LRRC14Q15048 493 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 C7orf31Q8N865 590 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 SLC44A5Q8NCS7 719 aa14.84□□□□□ -0.03
SNPH-201ENST00000381867 UBN1Q9NPG3 1134 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms