RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 RC3H1Q5TC82 1133 aaKnown RBP13.01□□□□□ -0.33
SHOX-203ENST00000381578 COL23A1Q86Y22 540 aaPredicted RBP13.01□□□□□ -0.33
SHOX-203ENST00000381578 ARHGEF26Q96DR7 871 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 NKX1-2Q9UD57 310 aaPredicted RBP13.01□□□□□ -0.33
SHOX-203ENST00000381578 CNTNAP4Q9C0A0 1308 aa13.01□□□□□ -0.33
SHOX-203ENST00000381578 PYGLP06737 847 aa13□□□□□ -0.33
SHOX-203ENST00000381578 ETS2P15036 469 aa13□□□□□ -0.33
SHOX-203ENST00000381578 KLRK1P26718 216 aa13□□□□□ -0.33
SHOX-203ENST00000381578 COG7P83436 770 aa13□□□□□ -0.33
SHOX-203ENST00000381578 MYL7Q01449 175 aa13□□□□□ -0.33
SHOX-203ENST00000381578 SEMA3FQ13275 785 aa13□□□□□ -0.33
SHOX-203ENST00000381578 DHX34Q14147 1143 aaKnown RBP13□□□□□ -0.33
SHOX-203ENST00000381578 SPOCK2Q92563 424 aa13□□□□□ -0.33
SHOX-203ENST00000381578 MAML1Q92585 1016 aa13□□□□□ -0.33
SHOX-203ENST00000381578 RIOK1Q9BRS2 568 aaKnown RBP13□□□□□ -0.33
SHOX-203ENST00000381578 EBF2Q9HAK2 575 aa13□□□□□ -0.33
SHOX-203ENST00000381578 METTL14Q9HCE5 456 aaKnown RBP13□□□□□ -0.33
SHOX-203ENST00000381578 ATP2A1O14983 1001 aa13□□□□□ -0.33
SHOX-203ENST00000381578 ATP9AO75110 1047 aa13□□□□□ -0.33
SHOX-203ENST00000381578 PHF2O75151 1096 aa13□□□□□ -0.33
SHOX-203ENST00000381578 PLS3P13797 630 aa13□□□□□ -0.33
SHOX-203ENST00000381578 PTDSS1P48651 473 aaKnown RBP13□□□□□ -0.33
SHOX-203ENST00000381578 UBXN2AP68543 259 aa13□□□□□ -0.33
SHOX-203ENST00000381578 BLMHQ13867 455 aa13□□□□□ -0.33
SHOX-203ENST00000381578 GRM4Q14833 912 aa13□□□□□ -0.33
SHOX-203ENST00000381578 TLDC1Q6P9B6 456 aa13□□□□□ -0.33
SHOX-203ENST00000381578 ELMO3Q96BJ8 720 aa13□□□□□ -0.33
SHOX-203ENST00000381578 ZNF512BQ96KM6 892 aaPredicted RBP13□□□□□ -0.33
SHOX-203ENST00000381578 IKZF4Q9H2S9 585 aa13□□□□□ -0.33
SHOX-203ENST00000381578 ITGB4P16144 1822 aa13□□□□□ -0.33
SHOX-203ENST00000381578 TOGARAM1Q9Y4F4 1720 aa13□□□□□ -0.33
SHOX-203ENST00000381578 SYNGAP1Q96PV0 1343 aa13□□□□□ -0.33
SHOX-203ENST00000381578 FAM196BA6NMK8 535 aa13□□□□□ -0.33
SHOX-203ENST00000381578 SSTR3P32745 418 aaPredicted RBP13□□□□□ -0.33
SHOX-203ENST00000381578 MMP13P45452 471 aa13□□□□□ -0.33
SHOX-203ENST00000381578 PTENP60484 403 aa13□□□□□ -0.33
SHOX-203ENST00000381578 SPARCL1Q14515 664 aa13□□□□□ -0.33
SHOX-203ENST00000381578 KNOP1Q1ED39 458 aaKnown RBP13□□□□□ -0.33
SHOX-203ENST00000381578 C2CD6Q53TS8 623 aa13□□□□□ -0.33
SHOX-203ENST00000381578 MAB21L3Q8N8X9 362 aa13□□□□□ -0.33
SHOX-203ENST00000381578 SLC30A5Q8TAD4 765 aa13□□□□□ -0.33
SHOX-203ENST00000381578 SNRNP27Q8WVK2 155 aaKnown RBP13□□□□□ -0.33
SHOX-203ENST00000381578 CELF1Q92879 486 aaKnown RBP13□□□□□ -0.33
SHOX-203ENST00000381578 DDX27Q96GQ7 796 aaKnown RBP13□□□□□ -0.33
SHOX-203ENST00000381578 PAGR1Q9BTK6 254 aa13□□□□□ -0.33
SHOX-203ENST00000381578 SLC5A4Q9NY91 659 aa13□□□□□ -0.33
SHOX-203ENST00000381578 TAS2R14Q9NYV8 317 aa13□□□□□ -0.33
SHOX-203ENST00000381578 RTN2O75298 545 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 DCTN3O75935 186 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 LDHCP07864 332 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 CALB2P22676 271 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 ZNF268Q14587 947 aaPredicted RBP12.99□□□□□ -0.33
SHOX-203ENST00000381578 SLC30A10Q6XR72 485 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 VGLL2Q8N8G2 317 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 SCFD1Q8WVM8 642 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 PGM2Q96G03 612 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 MMTAG2Q9BU76 263 aaKnown RBP12.99□□□□□ -0.33
SHOX-203ENST00000381578 KIAA1683Q9H0B3 1180 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 VCX3BQ9H321 246 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 RNPEPL1Q9HAU8 725 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 VCX3AQ9NNX9 186 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 MAD2L2Q9UI95 211 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 C5orf60A6NFR6 353 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 RSPH10B2B2RC85 870 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 RSPH10BP0C881 870 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 NMT1P30419 496 aaKnown RBP12.99□□□□□ -0.33
SHOX-203ENST00000381578 CACNA2D1P54289 1103 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 GRIK3Q13003 919 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 ZNF572Q7Z3I7 529 aaPredicted RBP12.99□□□□□ -0.33
SHOX-203ENST00000381578 FAM178BQ8IXR5 827 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 TEX9Q8N6V9 391 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 TTC17Q96AE7 1141 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 ZNF317Q96PQ6 595 aaPredicted RBP12.99□□□□□ -0.33
SHOX-203ENST00000381578 LZTS2Q9BRK4 669 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 SMYD3Q9H7B4 428 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 PHTF1Q9UMS5 762 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 AKAP3O75969 853 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 KITP10721 976 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 GCLMP48507 274 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 ZC2HC1CQ53FD0 456 aaPredicted RBP12.99□□□□□ -0.33
SHOX-203ENST00000381578 TAF1BQ53T94 588 aaPredicted RBP12.99□□□□□ -0.33
SHOX-203ENST00000381578 SNX30Q5VWJ9 437 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 OLFML2BQ68BL8 750 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
SHOX-203ENST00000381578 CTAGE3PQ8IX95 158 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 MIPOL1Q8TD10 442 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 STK32AQ8WU08 396 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 UCMAQ8WVF2 138 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 ALG3Q92685 438 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 SYN2Q92777 582 aaPredicted RBP12.99□□□□□ -0.33
SHOX-203ENST00000381578 CEP95Q96GE4 821 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 SLC12A4Q9UP95 1085 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 PLCH1Q4KWH8 1693 aa12.99□□□□□ -0.33
SHOX-203ENST00000381578 KDM3AQ9Y4C1 1321 aa12.98□□□□□ -0.33
SHOX-203ENST00000381578 PCP11498 1178 aaKnown RBP12.98□□□□□ -0.33
SHOX-203ENST00000381578 SOX5P35711 763 aa12.98□□□□□ -0.33
SHOX-203ENST00000381578 PSMC2P35998 433 aaKnown RBP12.98□□□□□ -0.33
SHOX-203ENST00000381578 PDCD2Q16342 344 aaPredicted RBP12.98□□□□□ -0.33
SHOX-203ENST00000381578 ASTE1Q2TB18 679 aaPredicted RBP12.98□□□□□ -0.33
SHOX-203ENST00000381578 MTDHQ86UE4 582 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms