RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CALCOCO2Q13137 446 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 HP1BP3Q5SSJ5 553 aaPredicted RBP14.88□□□□□ -0.03
SDC1-202ENST00000381150 NT5DC3Q86UY8 548 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 RBM46Q8TBY0 533 aaKnown RBP14.88□□□□□ -0.03
SDC1-202ENST00000381150 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.88□□□□□ -0.038e-8■■■■■ 27.2
SDC1-202ENST00000381150 TLCD1Q96CP7 247 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 SLC5A4Q9NY91 659 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 DLGAP2Q9P1A6 1054 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 NKX1-2Q9UD57 310 aaPredicted RBP14.88□□□□□ -0.03
SDC1-202ENST00000381150 ABCB11O95342 1321 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 SPDYE5A6NIY4 337 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 CLSTN1O94985 981 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 SNUPNO95149 360 aaKnown RBP14.87□□□□□ -0.03
SDC1-202ENST00000381150 BRAFP15056 766 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 ATP4AP20648 1035 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 GBP1P32455 592 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 STAT1P42224 750 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 MMP13P45452 471 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 CYP4A11Q02928 519 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 SPIRE1Q08AE8 756 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 ZNF268Q14587 947 aaPredicted RBP14.87□□□□□ -0.03
SDC1-202ENST00000381150 IRF2BP2Q7Z5L9 587 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 PIGWQ7Z7B1 504 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 GMCL1P1Q8NEA9 526 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 NUDCD1Q96RS6 583 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 GLT8D2Q9H1C3 349 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 PAPOLBQ9NRJ5 636 aaKnown RBP14.87□□□□□ -0.03
SDC1-202ENST00000381150 SMCHD1A6NHR9 2005 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 GSTA1P08263 222 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 HOXA7P31268 230 aaPredicted RBP14.87□□□□□ -0.03
SDC1-202ENST00000381150 ABL2P42684 1182 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 RPL21P46778 160 aaKnown RBP14.87□□□□□ -0.03
SDC1-202ENST00000381150 CASP4P49662 377 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 TMEM154Q6P9G4 183 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 TMEM179Q6ZVK1 233 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 TRIM59Q8IWR1 403 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 LRRC57Q8N9N7 239 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 ERP27Q96DN0 273 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 ANO3Q9BYT9 981 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 ADAM7Q9H2U9 754 aa14.87□□□□□ -0.03
SDC1-202ENST00000381150 METTL5Q9NRN9 209 aaKnown RBP14.87□□□□□ -0.03
SDC1-202ENST00000381150 AJAP1Q9UKB5 411 aaPredicted RBP14.87□□□□□ -0.03
SDC1-202ENST00000381150 H0YIN7 160 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 DDX3XO00571 662 aaKnown RBP eCLIP14.86□□□□□ -0.038e-8■■■□□ 15.1
SDC1-202ENST00000381150 AFPP02771 609 aaKnown RBP14.86□□□□□ -0.03
SDC1-202ENST00000381150 TNFAIP3P21580 790 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 CHRNA5P30532 468 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 MARCKSL1P49006 195 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 ADCY2Q08462 1091 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 CNGA2Q16280 664 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 ATP8B4Q8TF62 1192 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 PWWP2AQ96N64 755 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 EDEM3Q9BZQ6 932 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 LRRC27Q9C0I9 530 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 PPFIA2O75334 1257 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 SPAG7O75391 227 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 CASP5P51878 434 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 ZNF131P52739 623 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 RBM5P52756 815 aaKnown RBP eCLIP14.86□□□□□ -0.033e-7■■■■□ 25.8
SDC1-202ENST00000381150 SETDB1Q15047 1291 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 GRIPAP1Q4V328 841 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 PHLDB2Q86SQ0 1253 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 ETNPPLQ8TBG4 499 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 TEKT4Q8WW24 435 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 LENG9Q96B70 501 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 GMCL1Q96IK5 515 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 PRMT6Q96LA8 375 aaPredicted RBP14.86□□□□□ -0.03
SDC1-202ENST00000381150 TAOK3Q9H2K8 898 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 BCAS3Q9H6U6 928 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 TDRD3Q9H7E2 651 aaKnown RBP14.86□□□□□ -0.03
SDC1-202ENST00000381150 NKIRAS1Q9NYS0 192 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 AIPL1Q9NZN9 384 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 ZBTB12Q9Y330 459 aaPredicted RBP14.86□□□□□ -0.03
SDC1-202ENST00000381150 YDJCA8MPS7 323 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 ATMINO43313 823 aaPredicted RBP14.86□□□□□ -0.03
SDC1-202ENST00000381150 GDF11O95390 407 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 GCNT3O95395 438 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 PLA2G4BP0C869 781 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 ICA1Q05084 483 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 AOC3Q16853 763 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 CCDC137Q6PK04 289 aaKnown RBP14.86□□□□□ -0.03
SDC1-202ENST00000381150 MOXD1Q6UVY6 613 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 EXOC3L1Q86VI1 746 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 NAP1L4Q99733 375 aaKnown RBP14.86□□□□□ -0.03
SDC1-202ENST00000381150 FAM118BQ9BPY3 351 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 PITPNM3Q9BZ71 974 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 THAP2Q9H0W7 228 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 STMN4Q9H169 189 aaPredicted RBP14.86□□□□□ -0.03
SDC1-202ENST00000381150 ETAA1Q9NY74 926 aa14.86□□□□□ -0.03
SDC1-202ENST00000381150 POTEFA5A3E0 1075 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 NDUFB10O96000 172 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 LINGO3P0C6S8 592 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 POTEIP0CG38 1075 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 PON1P27169 355 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 SNAP25P60880 206 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 ZFYVE27Q5T4F4 411 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 POTEGQ6S5H5 508 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 POTEEQ6S8J3 1075 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 SCFD1Q8WVM8 642 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 ARHGEF26Q96DR7 871 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms