RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 NEURL1BA8MQ27 555 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 PRKAB2O43741 272 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 LDHAP00338 332 aaKnown RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 IRF1P10914 325 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 PDHBP11177 359 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 SFR1Q86XK3 245 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 CRLF3Q8IUI8 442 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 COG1Q8WTW3 980 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 SYMPKQ92797 1274 aaKnown RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 F8VZ95 297 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 PRPF4O43172 522 aaKnown RBP eCLIP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 POLR2EP19388 210 aaKnown RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 C21orf59P57076 290 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 AOC3Q16853 763 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 ARHGEF1Q92888 912 aaKnown RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 TGS1Q96RS0 853 aaKnown RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 RAVER2Q9HCJ3 691 aaKnown RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 PRAMEF22A3QJZ6 481 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 STX7O15400 261 aaKnown RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 MOCS3O95396 460 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 RBM6P78332 1123 aaKnown RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 PPIDQ08752 370 aaKnown RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 HIC1Q14526 733 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 PPP6R3Q5H9R7 873 aaPredicted RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 SLC27A3Q5K4L6 730 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 TMEM106CQ9BVX2 250 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 YEATS2Q9ULM3 1422 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 TRPM2O94759 1503 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 SRGAP2BP0DMP2 458 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 ALOX15P16050 662 aaPredicted RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 SLC7A5Q01650 507 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 PTK2Q05397 1052 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 TRPM8Q7Z2W7 1104 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 DEPDC1BQ8WUY9 529 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 ARHGAP45Q92619 1136 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 UBE2TQ9NPD8 197 aaPredicted RBP11.41□□□□□ -0.58
CLCN4-202ENST00000380833 ARHGEF10O15013 1369 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 A0A0D9SFI3 127 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 CCT8L1PA6NM43 557 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 MAPK4P31152 587 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 C11orf74Q86VG3 221 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 OSBPL10Q9BXB5 764 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 SMARCAD1Q9H4L7 1026 aa11.41□□□□□ -0.58
CLCN4-202ENST00000380833 USP17L3A6NCW0 530 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 USP17L4A6NCW7 530 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 MYBL1P10243 752 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 IMPDH2P12268 514 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 PLTPP55058 493 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 USP17L1Q7RTZ2 530 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 ZKSCAN4Q969J2 545 aaPredicted RBP11.4□□□□□ -0.58
CLCN4-202ENST00000380833 EDEM3Q9BZQ6 932 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 DMAP1Q9NPF5 467 aaPredicted RBP11.4□□□□□ -0.58
CLCN4-202ENST00000380833 C15orf41Q9Y2V0 281 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 BTBD18B2RXH4 712 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 IGF2BP3O00425 579 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLCN4-202ENST00000380833 IDH3BO43837 385 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 GFPT2O94808 682 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 TUFMP49411 452 aaKnown RBP11.4□□□□□ -0.58
CLCN4-202ENST00000380833 PI16Q6UXB8 463 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 CHCHD4Q8N4Q1 142 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 FBXL13Q8NEE6 735 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 RAET1EQ8TD07 263 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 NCLNQ969V3 563 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 C19orf60Q96EN9 201 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 NACC1Q96RE7 527 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 RAD18Q9NS91 495 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 PARVAQ9NVD7 372 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 FANCLQ9NW38 375 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 ZHX2Q9Y6X8 837 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 UNC13AQ9UPW8 1703 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 SEC24DO94855 1032 aaPredicted RBP11.4□□□□□ -0.58
CLCN4-202ENST00000380833 KIF19Q2TAC6 998 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 THEMIS2Q5TEJ8 643 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 NOSTRINQ8IVI9 506 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 ANKRD13AQ8IZ07 590 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 HPS5Q9UPZ3 1129 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 CLIC4Q9Y696 253 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 DDAH1O94760 285 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 ATP6V1B1P15313 513 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 PFKFB1P16118 471 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 PTH1RQ03431 593 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 PTGDRQ13258 359 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 ZC3H12BQ5HYM0 836 aaKnown RBP11.4□□□□□ -0.58
CLCN4-202ENST00000380833 RABGAP1LQ5R372 815 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 ARMC3Q5W041 872 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 CIAPIN1Q6FI81 312 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 CYFIP2Q96F07 1278 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 PBKQ96KB5 322 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 BLOC1S6Q9UL45 172 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 IRAK1P51617 712 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 NME3Q13232 169 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 AHI1Q8N157 1196 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 NLGN1Q8N2Q7 840 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 CDHR1Q96JP9 859 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 MAGEB10Q96LZ2 347 aaPredicted RBP11.4□□□□□ -0.58
CLCN4-202ENST00000380833 TESK2Q96S53 571 aa11.4□□□□□ -0.58
CLCN4-202ENST00000380833 SRPK1Q96SB4 655 aaKnown RBP11.4□□□□□ -0.58
CLCN4-202ENST00000380833 CFAP99D6REC4 459 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms