RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 GJB7Q6PEY0 223 aa23.34■■□□□ 1.33
GMDS-202ENST00000380815 C17orf99Q6UX52 265 aa23.34■■□□□ 1.33
GMDS-202ENST00000380815 GPIHBP1Q8IV16 184 aa23.34■■□□□ 1.33
GMDS-202ENST00000380815 FMNL3Q8IVF7 1028 aa23.34■■□□□ 1.33
GMDS-202ENST00000380815 TXLNBQ8N3L3 684 aa23.34■■□□□ 1.33
GMDS-202ENST00000380815 LACRTQ9GZZ8 138 aa23.34■■□□□ 1.33
GMDS-202ENST00000380815 TMEM117Q9H0C3 514 aa23.34■■□□□ 1.33
GMDS-202ENST00000380815 RNPEPQ9H4A4 650 aa23.34■■□□□ 1.33
GMDS-202ENST00000380815 USP20Q9Y2K6 914 aa23.34■■□□□ 1.33
GMDS-202ENST00000380815 URI1O94763 535 aaPredicted RBP23.33■■□□□ 1.33
GMDS-202ENST00000380815 SMPD1P17405 629 aa23.33■■□□□ 1.33
GMDS-202ENST00000380815 GTF2H1P32780 548 aa23.33■■□□□ 1.33
GMDS-202ENST00000380815 GFPT1Q06210 699 aaPredicted RBP23.33■■□□□ 1.33
GMDS-202ENST00000380815 ZNF484Q5JVG2 852 aa23.33■■□□□ 1.33
GMDS-202ENST00000380815 TRIM10Q9UDY6 481 aa23.33■■□□□ 1.33
GMDS-202ENST00000380815 DNAJC12Q9UKB3 198 aa23.33■■□□□ 1.33
GMDS-202ENST00000380815 ZNF233A6NK53 670 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 HOXC6P09630 235 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 ANXA13P27216 316 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 STAT1P42224 750 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 SLC18A3Q16572 532 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 LRRC71Q8N4P6 559 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 CCDC127Q96BQ5 260 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 FAM213AQ9BRX8 229 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 TLL2Q9Y6L7 1015 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 LRRIQ3A6PVS8 624 aaPredicted RBP23.32■■□□□ 1.32
GMDS-202ENST00000380815 F8VZ95 297 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 SLU7O95391 586 aaKnown RBP23.32■■□□□ 1.32
GMDS-202ENST00000380815 HOXD8P13378 290 aaPredicted RBP23.32■■□□□ 1.32
GMDS-202ENST00000380815 FERP16591 822 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 KRT39Q6A163 491 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 ZPBP2Q6X784 338 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 SLC35F6Q8N357 371 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 TRAPPC12Q8WVT3 735 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 CCDC113Q9H0I3 377 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 TMEM8AQ9HCN3 771 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 SUCLA2Q9P2R7 463 aaPredicted RBP23.32■■□□□ 1.32
GMDS-202ENST00000380815 AGO2Q9UKV8 859 aaKnown RBP23.32■■□□□ 1.32
GMDS-202ENST00000380815 ZHX1Q9UKY1 873 aaPredicted RBP23.32■■□□□ 1.32
GMDS-202ENST00000380815 TFR2Q9UP52 801 aa23.32■■□□□ 1.32
GMDS-202ENST00000380815 FAM155AB1AL88 458 aaPredicted RBP23.31■■□□□ 1.32
GMDS-202ENST00000380815 PJA2O43164 708 aa23.31■■□□□ 1.32
GMDS-202ENST00000380815 SOX5P35711 763 aa23.31■■□□□ 1.32
GMDS-202ENST00000380815 MAGEA1P43355 309 aa23.31■■□□□ 1.32
GMDS-202ENST00000380815 PTK2Q05397 1052 aa23.31■■□□□ 1.32
GMDS-202ENST00000380815 PHLDB3Q6NSJ2 640 aa23.31■■□□□ 1.32
GMDS-202ENST00000380815 CCDC102AQ96A19 550 aa23.31■■□□□ 1.32
GMDS-202ENST00000380815 VTI1AQ96AJ9 217 aa23.31■■□□□ 1.32
GMDS-202ENST00000380815 C16orf70Q9BSU1 422 aa23.31■■□□□ 1.32
GMDS-202ENST00000380815 TARS2Q9BW92 718 aaKnown RBP23.31■■□□□ 1.32
GMDS-202ENST00000380815 C2orf40Q9H1Z8 148 aa23.31■■□□□ 1.32
GMDS-202ENST00000380815 LUC7LQ9NQ29 371 aaKnown RBP23.31■■□□□ 1.32
GMDS-202ENST00000380815 ZNF215Q9UL58 517 aaPredicted RBP23.31■■□□□ 1.32
GMDS-202ENST00000380815 COQ4Q9Y3A0 265 aa23.31■■□□□ 1.32
GMDS-202ENST00000380815 A0A0B4J269 797 aa23.3■■□□□ 1.32
GMDS-202ENST00000380815 CTAGE9A4FU28 777 aa23.3■■□□□ 1.32
GMDS-202ENST00000380815 ASAP2O43150 1006 aa23.3■■□□□ 1.32
GMDS-202ENST00000380815 C22orf31O95567 290 aa23.3■■□□□ 1.32
GMDS-202ENST00000380815 LDHAP00338 332 aaKnown RBP23.3■■□□□ 1.32
GMDS-202ENST00000380815 INSRRP14616 1297 aa23.3■■□□□ 1.32
GMDS-202ENST00000380815 TFDP1Q14186 410 aa23.3■■□□□ 1.32
GMDS-202ENST00000380815 DRAP1Q14919 205 aaPredicted RBP23.3■■□□□ 1.32
GMDS-202ENST00000380815 EFCAB12Q6NXP0 572 aa23.3■■□□□ 1.32
GMDS-202ENST00000380815 ZBTB8OSQ8IWT0 167 aa23.3■■□□□ 1.32
GMDS-202ENST00000380815 RNF149Q8NC42 400 aa23.3■■□□□ 1.32
GMDS-202ENST00000380815 ZFYVE28Q9HCC9 887 aa23.3■■□□□ 1.32
GMDS-202ENST00000380815 COL1A2P08123 1366 aa23.3■■□□□ 1.32
GMDS-202ENST00000380815 MAGEB2O15479 319 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 MSCO60682 206 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 SRGAP2CP0DJJ0 459 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 CLDN10P78369 228 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 SREBF2Q12772 1141 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 ZNF571Q7Z3V5 609 aaPredicted RBP23.29■■□□□ 1.32
GMDS-202ENST00000380815 USP6NLQ92738 828 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 GPR88Q9GZN0 384 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 HAPLN2Q9GZV7 340 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 ADAMTS1Q9UHI8 967 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 A0A087X0T9 212 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 EDN1P05305 212 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 CCDC172P0C7W6 258 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 FAM228BP0C875 321 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 PSMD6Q15008 389 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 ENOX2Q16206 610 aaKnown RBP23.29■■□□□ 1.32
GMDS-202ENST00000380815 RHPN2Q8IUC4 686 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 OR6J1Q8NGC5 347 aa23.29■■□□□ 1.32
GMDS-202ENST00000380815 POP1Q99575 1024 aaKnown RBP23.29■■□□□ 1.32
GMDS-202ENST00000380815 NAPGQ99747 312 aaPredicted RBP23.29■■□□□ 1.32
GMDS-202ENST00000380815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.29■■□□□ 1.323e-6■■□□□ 14
GMDS-202ENST00000380815 MRPL4Q9BYD3 311 aaKnown RBP23.29■■□□□ 1.32
GMDS-202ENST00000380815 H3BRB1 525 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 MMP3P08254 477 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 ZNF286BP0CG31 522 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 MAP2K1Q02750 393 aaPredicted RBP23.28■■□□□ 1.32
GMDS-202ENST00000380815 TNFAIP2Q03169 654 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 TUBB2AQ13885 445 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 MAPK6Q16659 721 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 C10orf76Q5T2E6 689 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 METTL13Q8N6R0 699 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 ERO1AQ96HE7 468 aa23.28■■□□□ 1.32
GMDS-202ENST00000380815 ZBTB45Q96K62 511 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms